AnalystTF 1.7.1 Software Installation Guide

AnalystTF 1.7.1 Software Installation Guide
Analyst® TF 1.7.1 Software
Software Installation Guide
5039999 A/RUO-IDV-02-1199-B
May 2015
This document is provided to customers who have purchased SCIEX equipment to use in the
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Software that may be described in this document is furnished under a license agreement. It
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Contents
Chapter 1 Introduction....................................................................5
Important Information to Know Before Installing.......................................5
Support.......................................................................................................6
Chapter 2 Software Installation Requirements.............................7
Operating System Requirements.................................................................7
Network Environment.................................................................................7
Acquisition Workstation Requirements for the
Dell Precision T3600 and T5810 Computers................................................7
Acquisition Workstation Requirements for the
Dell Optiplex XE2 Computer........................................................................8
Processing Workstation Requirements........................................................8
Supported Acquisition Computer Models....................................................9
Current Shipping Configuration for the Dell
Precision T3600 and T5810 Acquisition
Workstations...............................................................................................9
Current Shipping Configuration for the Dell
Optiplex XE2 Acquisition Workstation......................................................10
Supported Cards and Driver Versions........................................................10
Compatibility with Other Software............................................................12
Supported Mass Spectrometers.................................................................13
Contents of the Analyst TF Software DVD.................................................13
Chapter 3 Installation Instructions...............................................16
Analyst® TF 1.7.1 Software Installation for
TripleTOF® 6600 Mass Spectrometer.......................................................16
New Customers: Fresh Installation on
Windows 7 (64-bit) Operating System...............................................17
New Customers: Fresh Installation on
Windows 7 (32-bit) Operating System...............................................17
Existing Customers: Upgrade to Analyst® TF
1.7.1 Software...................................................................................20
Analyst® TF 1.7.1 Software Installation for
TripleTOF® 5600, 5600+, or 4600 Mass
Spectrometer.............................................................................................24
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Contents
New Customers: Fresh Installation of
Analyst® TF 1.7.1 on Windows 7 (64-bit)
Operating System..............................................................................25
New Customers: Fresh Installation of
Analyst® TF 1.7.1 on Windows 7 (32-bit)
Operating System..............................................................................25
Existing Analyst TF 1.6 Software
Customers: Upgrade to Analyst TF 1.7.1
Software............................................................................................27
Existing Analyst TF 1.7 Software
Customers: Upgrade to Analyst TF 1.7.1
Software............................................................................................38
(Optional) Install Scripts............................................................................43
(Optional) Install PeakView® 2.2 Software..............................................43
Run the Software for the First Time..........................................................43
Register the Software................................................................................43
Appendix A Firmware and Configuration Tables Files...............45
Appendix B Peripheral Devices and Firmware............................46
Notes on Firmware for Agilent Users........................................................56
Peripheral Devices Controlled via AAO Software
Interface....................................................................................................57
Appendix C Troubleshooting Tips ...............................................58
Appendix D Intel Dual Port Card Configuration.........................60
Configure the Card ...................................................................................60
Confirm the DAD Settings.........................................................................62
Appendix E Software Documentation.........................................64
Revision History.............................................................................68
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1
Introduction
®
®
The Analyst TF 1.7.1 software supports the TripleTOF 4600, 5600, 5600+,
TM
TM
5600+ with SelexION Technology, 6600, and 6600 with SelexION Technology
systems.
This guide provides information about, and procedures for, installing the Analyst
TF 1.7.1 software. The guide also includes information on supported devices and
firmware and troubleshooting installation.
For information about new software features, enhancements, and known issues,
refer to the Release Notes for the software included with the software package.
Important Information to Know Before Installing
Note: Back up the Analyst Data folder to a safe location if it exists.
To make sure that the software installation is successful, read the following points
carefully before starting any of the procedures in this guide:
®
•
All versions of the Analyst TF software require a valid software license.
These licenses are provided with new instrument purchases and can also
be purchased separately from SCIEX. If you have any questions regarding
the validity of your current license or to enquire about purchasing
additional licenses, please contact your SCIEX sales representative or
Technical Support using http://sciex.com/support/request-support.
•
Do not attempt to install the software without following the installation
instructions provided in this guide.
•
The Analyst TF 1.7.1 Software data files are not compatible with all
previous versions of the Analyst TF software. However, you can open data
acquired in the previous versions of the Analyst TF software in the Analyst
TF 1.7.1 Software.
•
All peripheral devices supported in the Analyst TF 1.5 software and later
continue to be supported in the Analyst TF 1.7.1 Software. Refer to
Peripheral Devices and Firmware on page 46.
•
The Analyst TF 1.7.1 Software is available as a software DVD for customers.
Refer to Installation Instructions on page 16.
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Introduction
•
The Analyst TF 1.7.1 Software cannot be installed on the same computer
as the Analyst Administrator Console (AAC) server software.
•
For more information about the compatibility of the Analyst TF 1.7.1
Software with other software applications, refer to Compatibility with
Other Software on page 12.
Support
®
At SCIEX, we are committed to providing the highest level of support for Analyst
TF 1.7.1 software users. To obtain answers to questions about any of our products,
report issues, or suggest improvements, visit the Web site at www.sciex.com.
For on-site service, support, and training, contact your local SCIEX Sales
Representative or Field Service Employee.
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Software Installation
Requirements
2
This section explains the operating system, hardware, and software requirements
®
that acquisition and processing workstations must meet for the Analyst TF 1.7.1
software to operate.
Operating System Requirements
®
The Analyst TF 1.7.1 Software requires Microsoft Windows 7 (32-bit) or (64-bit)
SP1 operating system on Dell Precision T3600, Dell Precision Tower 5810 (T5810),
Dell Optiplex 9010, or Dell Optiplex XE2 computers.
®
The TripleTOF 6600 System requires the Dell Precision computer.
The TripleTOF 4600 and 5600/5600+ systems require the Dell Optiplex computer.
The Analyst TF 1.7.1 software does not currently support any other operating
system.
Network Environment
®
The Analyst TF 1.7.1 software supports the Microsoft Windows Server 2008 R2
network environment.
Acquisition Workstation Requirements for the Dell
Precision T3600 and T5810 Computers
It is highly recommended that you purchase an acquisition workstation, including
the communication interface cards, from SCIEX. These configured systems meet
®
all requirements and undergo extensive testing and verification with the Analyst
TF software. Detailed specifications for these systems are shipped with the
workstation. For more information, contact a SCIEX sales representative.
®
For acquisition workstations for TripleTOF 6600 systems, SCIEX recommends
the following minimum computer configurations:
For Dell Precision T3600 Computer
•
Hexa Intel Xeon E5-1660 Processor 3.30 GHz
•
4 GB (2 X 2 GB) RAM
•
2 × 2 Tb HDD (RAID1)
•
DVD ± RW
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•
Network card - Intel Pro/1000 PT Dual port
•
Windows 7 (32-bit) or (64-bit) Professional
For Dell Precision T5810 Computer
•
Quad Intel Xeon E5-1620v3 Processor 3.50 GHz
•
8 GB RAM
•
2 × 2 Tb HDD (RAID1)
•
DVD ± RW
•
Network cards - two Intel I210 T1, Intel Pro/1000 PT Dual port (optional)
•
Windows 7 (32-bit) or (64-bit) Professional
The Analyst TF 1.7.1 Software has been qualified for acquisition on the current
PC configuration. Refer to Current Shipping Configuration for the Dell
Precision T3600 and T5810 Acquisition Workstations.
Acquisition Workstation Requirements for the Dell
Optiplex XE2 Computer
It is highly recommended that you purchase an acquisition workstation, including
the communication interface cards, from SCIEX. These configured systems meet
®
all requirements and undergo extensive testing and verification with the Analyst
TF software. Detailed specifications for these systems are shipped with the
workstation. For more information, contact a SCIEX sales representative.
®
For acquisition workstations for TripleTOF 4600 and 5600/5600+ systems, SCIEX
recommends the following minimum computer configuration:
•
Intel Core 15-4570S processor (Quad core, 2.90 GHz, 6MB with HD
Graphics 4600)
•
8 GB (2 × 4 GB) DDR3 1600Mhz SDRAM
The Analyst TF 1.7.1 Software has been qualified for acquisition on the current
PC configuration. Refer to Current Shipping Configuration for the Dell
Optiplex XE2 Acquisition Workstation.
Processing Workstation Requirements
For data processing workstations, SCIEX recommends the following minimum
computer configuration:
•
Intel Core I5-3550s
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•
4 GB (2 × 2 GB) DDR3 1600Mhz SDRAM
Some SCIEX add-on software requires additional memory, disk space, and
processing speed. Refer to the documentation included with that software.
Supported Acquisition Computer Models
®
As of the software release date, the Analyst TF 1.7.1 software has been tested
and verified for compatibility with the Dell Precision T3600 and T5810 computers
and Dell Optiplex 9010 and XE2 computers.
Note: Newer systems might become available. For more information, contact
a SCIEX sales representative.
Current Shipping Configuration for the Dell Precision
T3600 and T5810 Acquisition Workstations
The Dell Precision T3600 and T5810 acquisition workstations come installed with
the Windows 7 (64-bit) Professional operating system and all driver software for
the cards.
They can include the following devices:
•
National Instruments USB to GPIB
•
Cronologic ADC card
•
National Instruments ADC
•
EdgePort USB to serial converter (optional)
•
Network Card — Broadcom (Optional in case of Dell Precision
T5810 computer)
•
Network card – Intel Pro/1000 PT Dual port (optional)
•
Nvidia Quadro nvs-310
•
National Instruments M Series Special Kit for SCIEX, required for analog
signal measurement
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Software Installation Requirements
CAUTION: Potential Acquisition Interference. Do not change the
power management settings in the BIOS. Changing the power
management settings might interfere with batch acquisition
by introducing long delay times between samples.
Current Shipping Configuration for the Dell Optiplex
XE2 Acquisition Workstation
The Dell Optiplex XE2 acquisition workstation comes installed with the Windows
7 (64-bit) Professional operating system. It also includes an embedded Windows
7 Professional (32-bit) OS license.
This computer is RoHS compliant and can be used as an acquisition workstation
or stand-alone processing computer. Windows 7 comes with Internet Explorer
8.0. Most driver software required for the cards is installed. The Cronologic TDC
Card driver requires installation on both the Windows 7 (64-bit) and Windows 7
(32-bit) configurations.
The acquisition workstation includes the following peripherals:
•
Two Broadcom network cards PCIe Ethernet, 1 port
•
Cronologic TDC PCI Adapter card, for use with the Time-to-Digital
Converter (TDCx8) (installed)
The acquisition workstation supports the following external interfaces and card:
•
GPIB (not included)
•
Serial (not included)
•
NI DAQ ADC PCIe card (not included)
CAUTION: Potential Acquisition Interference. Do not change the
power management settings in the BIOS. Changing the power
management settings might interfere with batch acquisition
by introducing long delay times between samples.
Supported Cards and Driver Versions
The table shows the driver versions installed on the currently shipping acquisition
workstation, the supported driver versions, and the supported slots.
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Table 2-1 Supported Cards and Drivers
Card name
Dell Precision T3600 Dell Optiplex XE2
and T5810
and 9010, Windows
7 (32-bit) and (64-bit)
Driver version
Driver version
GPIB
2.8
2.8
ADC
NiDAQ 9.2.3
NiDAQ 9.2.3
Network card – Intel
Pro/1000 PT Dual port
9.3.28.0 or later (For
T3600)
9.3.41.0 or later
9.13.4.10 (For T5810)
Network card – Intel
I210 T1
12.7.28.0 (For T5810)
n/a
Edgeport USB
5.7
5.7
Network Card —
Broadcom
14.6.0.6 or later (For
T3600)
16.2.0.4 or later
16.2.0.4 (For T5810)
Cronologic ADC**
Cronologic 0.9.37
n/a
Cronologic TDC*
n/a
3.5.2
Nvidia Quadro nvs-310 320.09 (9.18.13.2009)
(For T3600)
n/a
340.66 (9.18.13.4066)
(For T5810)
* This driver needs to be installed manually on the Dell Optiplex (XE2 and 9010)
Windows 7 image.
** The Cronologic ADC driver needs to be manually installed on Dell Precision
T3600 Win7 (32-bit) image.
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Software Installation Requirements
Compatibility with Other Software
At the time of this release, the following SCIEX software releases are compatible
®
with the Analyst TF 1.7.1 software data files acquired with and without using
TM
the SelexION technology. Some of the software might need to be ordered from
the manufacturer before beginning the installation. For the most recent software
versions, visit the Web site at www.sciex.com.
To obtain a link to download software or to obtain a license, visit the SCIEX
Software Downloads section at http://sciex.com/support/software-downloads.
Table 2-2 Compatible Software
SCIEX Software
BioPharmaView
Software
TM
Yes, 1.0
No
Yes, 1.0
No
Software
TM
Software Yes, 1.2.1
No
TM
Software
Yes, 1.1
No
TM
Yes, 1.5
No
Yes, 2.0
No
Yes, 3.0.2
Yes, 3.0.2
Yes, 2.2
Yes, 2.2
Yes, 5.0
Yes, 5.0
MarkerView
MasterView
MetabolitePilot
Software
ALL
TM
MS/MS with SWATH
Acquisition MicroApp
Software
TM
Software
®
PeakView Software
ProteinPilot
Compatible with
Analyst TF 1.7.1
software data files
acquired using
TM
SelexION
Technology
TM
LibraryView
MultiQuant
Compatible with
Analyst TF 1.7.1
software data
files
TM
Software
To inquire about the compatibility of software not included in this list, contact a
SCIEX support or sales representative.
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Supported Mass Spectrometers
®
The Analyst TF 1.7.1 software can control and analyze data from each of the
following SCIEX mass spectrometers:
®
•
TripleTOF 4600 system
•
TripleTOF 5600/5600+ system
•
TripleTOF 5600+ system with SelexION
•
TripleTOF 6600 system
•
TripleTOF 6600 system with SelexION Technology
TM
Technology
Contents of the Analyst TF Software DVD
The following software applications, files, folders, and documents are included
®
on the Analyst TF 1.7.1 software DVD:
•
Analyst TF 1.7.1 software
•
Drivers folder containing the ADC, Cronologic, Edgeport 5.7, and GPIB 2.8
drivers folders. These folders contain the software for all supported cards.
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•
An Extras folder containing the following subfolders:
•
AAO: Contains the Analyst Access Object release notes and user
guide.
•
ACROREAD: Contains the Adobe Acrobat Reader 9.1 installer.
•
Agilent Ethernet Networking (BOOTP) Package: Contains
instructions and a utility to control the Agilent LC devices using
Ethernet.
•
ConfigUpdater: Contains the Configuration Updater Utility that is
used to update the firmware and configuration table located on
the instrument.
•
Examples: Contains sample .mol files.
•
PeakView 2.2: Contains the PeakView software installer,
documentation, and extra utilities.
•
ResetSystemController: Contains a utility software for resetting the
instrument controller.
•
Scripts: Contains a collection of scripts that users can install if they
want.
•
Updated Reference Table: Contains the new reference table
TuneData.tun file. If desired, you can overwrite the existing
reference table for the Analyst TF 1.6 software with this new
reference table. To overwrite the existing Tunedata.tun file, copy
the new TuneData.tun file from the Extra\Updated Reference Table
folder on the DVD, and then paste it into the Analyst Data\API
Instrument\Preferences folder.
CAUTION: If you overwrite the existing
TuneData.tun file, any modified or user-created
reference tables will be lost.
•
•
Scripting Cookbook: Contains a guide that provides information
for writing applications to extend the functionality of the Analyst
TF 1.7.1 software.
The Release Notes for the Analyst TF 1.7.1 software.
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•
The Software Installation Guide for the Analyst TF 1.7.1 software
(this document).
•
An Install folder that contains the software guides as well as tutorials for
all mass spectrometers. It also contains the scripts. The scripts are
experimental and provide research-grade functionality that can be added
to the software. The contents in this folder will be copied to the computer
after software installation. All documents will be accessible through the
Start > Program menu.
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3
Installation Instructions
This section provides important information and procedures for installing or
®
upgrading to the Analyst TF 1.7.1 software on acquisition and processing
workstations.
Note: Back up the Analyst Data folder to a safe location if it exists.
Note: To install the Analyst TF 1.7.1 Software, you must have Administrator
privileges on the workstation.
The Analyst TF 1.7.1 software can be installed as a fresh installation or can be
upgraded to from a supported previous version of the software. Based on the
mass spectrometer being used, select the procedure to install the Analyst TF 1.7.1
software.
Analyst® TF 1.7.1 Software Installation for
TripleTOF® 6600 Mass Spectrometer
In case of TripleTOF 6600 mass spectrometer, the Analyst TF 1.7.1 software can
be installed on computers with Windows 7(64-bit) and Windows 7 (32-bit)
operating systems in following ways:
•
Fresh installation without any previous version of the Analyst TF software
installed.
•
Upgrade to Analyst TF 1.7.1 software from existing Analyst TF 1.7 software.
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Installation Instructions
New Customers: Fresh Installation on Windows 7 (64-bit) Operating
System
Use the following procedure to install the Analyst TF 1.7.1 software on the Dell
Precision T3600 or T5810 computer with Windows 7 (64-bit) operating system.
The computer comes with the TripleTOF 6600 mass spectrometer.
•
(Only applicable to T3600 computer) Install the Edgeport driver
5.7 from the Analyst TF 1.7.1 installation DVD. Refer to Install the
Edgeport Driver.
Install Analyst® TF 1.7.1 Software
1.
Locate the Analyst TF 1.7.1 Software DVD required for the
installation.
2.
If required, locate any DVDs or CDs containing optional add-on software.
3.
Log on to the computer as a user with Windows local administrator
privileges.
4.
Insert the Analyst TF 1.7.1 Software DVD in the DVD drive of the
computer.
5.
On the DVD, browse to the Analyst TF 1.7.1 Software folder and
double-click setup.exe.
6.
Follow the instructions on the screen to install the Analyst TF software.
By default, the Security mode is set to Integrated.
New Customers: Fresh Installation on Windows 7 (32-bit) Operating
System
If users want to freshly install the Analyst TF 1.7.1 software on a Dell Precision
T3600 or a Dell Precision T5810 computer that came with Windows 7 (64-bit) OS
but want to use Windows 7 (32-bit) operating system (OS), then use the following
procedure.
CAUTION: Potential Data Loss. Before re-imaging the Dell
Precision T3600 or T5810 computer, copy all of the required data
files and programs to an external hard drive. Failure to copy all
of the required data files to a location other than the Dell
Precision T3600 or T5810 computer could result in permanent
loss of data and applications.
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Installation Instructions
1.
Re-image the T3600 or the T5810 computer with Windows 7 (64-bit) OS
to Windows 7 (32-bit) OS. Refer to Re-image Dell Precision T3600
or T5810 computers with Windows 7 (64-bit) Operating
System to Windows 7 (32-bit) Operating System
2.
(Only applicable to T3600 computer) Remove the old ADC driver.
Refer to Remove the Old ADC Driver.
3.
(Only applicable to T3600 computer) Install the new ADC driver
from the Analyst TF 1.7.1 installation DVD. Refer to the Install the
Cronologic ADC Driver.
4.
(Only applicable to T3600 computer) Install the Edgeport driver
5.7 from the Analyst TF 1.7.1 installation DVD. Refer to Install the
Edgeport Driver.
5.
Install the Analyst TF 1.7.1 software. Refer to Install Analyst® TF 1.7.1
Software.
Re-image Dell Precision T3600 or T5810 computers with Windows 7
(64-bit) Operating System to Windows 7 (32-bit) Operating System
CAUTION: Potential System Damage. The following steps must
be performed by a SCIEX Field Service Employee. Please contact
your SCIEX Sales or Service Representative to help you with the
upgrade. Additional service costs might apply.
Required Materials
•
SCIEX Recovery Activation Tool – T3600 PC and TripleTOF 6600
Instrument (not included with the shipping computer)
•
SCIEX Recovery Activation Disc: This disc is provided with the Dell
Precision T5810 computer.
1.
Turn on the computer.
2.
During the restart, insert the SCIEX Recovery Activation Disc into the CD
ROM drive.
The CD runs automatically during restart.
3.
Press F12 during the startup.
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Installation Instructions
4.
In the bootup screen, choose bootup from CD/DVD Drive.
5.
In the setup screen for the SCIEX Recovery Activation Disc, select Load
C: drive image from Recovery drive. (Option 1).
6.
Follow the on-screen instructions to set up the appropriate operating
system.
7.
After the re-imaging is complete, restart the computer.
Remove the Old ADC Driver
1.
Navigate to Start > Control Panel .
2.
Click Programs and Features.
3.
Under Name, click the ADC driver to be removed.
4.
Click Uninstall.
Install the Cronologic ADC Driver
1.
Log on to the computer as a user with Windows local administrator
privileges.
2.
Insert the Analyst TF 1.7.1 Software DVD in the DVD drive of the computer.
3.
Navigate to the Drivers\Cronologic folder on the DVD.
4.
Locate the ADC driver and double-click the ndigo_driver_v0.9.37.exe
file.
5.
Follow the on-screen instructions to install the driver.
Install the Edgeport Driver
1.
Make sure that the Edgeport device is not connected to the computer.
2.
Log on to the computer as a user with Windows local administrator
privileges.
3.
Insert the Analyst TF 1.7.1 Software DVD in the DVD drive of the computer.
4.
Navigate to the Drivers\Edgeport folder on the DVD.
5.
Locate the Edgeport driver and double-click 40002537_J.exe file.
6.
Follow the on-screen instructions to install the driver.
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Installation Instructions
Existing Customers: Upgrade to Analyst® TF 1.7.1 Software
Upgrade to Analyst TF 1.7.1 Software on Windows 7 (64-bit) Operating
System
If users have Analyst TF 1.7 software installed on a Dell Precision T3600 computer
with Windows 7 (32-bit) operating system and they want to upgrade to Analyst
TF 1.7.1 software on Windows 7(64-bit) OS, then use the following procedure:
Note: Before installing the Analyst TF 1.7.1 software, determine the
performance level of the mass spectrometer by creating a set of baseline data.
To create a set of baseline data, create a .wiff file for each scan type (Q1, TOF
MS, TOF MSMS) for each polarity. You can use the Tuning Solution for positive
mode and Taurocholic acid 2 ng/μL for negative mode. This baseline data will
be used to confirm the instrument performance after the installation of the
Analyst TF 1.7.1 software.
Note: To install the Analyst TF 1.7.1 software, you must have Administrator
privileges on the workstation.
Follow all the steps listed below in the same sequence as they are shown in
this document to successfully install the Analyst TF 1.7.1 software. Steps 1 to 6
are necessary. Each step is explained on the following pages and must be followed
as described:
CAUTION: Potential System Damage. The following steps must
be performed by a SCIEX Field Service Employee. Please contact
your SCIEX Sales or Service Representative to help you with the
upgrade. Additional service costs might apply.
1.
It is critical that you back up all of the important information
on an external hard disk or on the network before installing the Analyst
TF 1.7.1 software. Back up the following:
•
InstrumentData.ins file from Analyst Data\Projects\API
Instrument\Instrument Data.
•
ParameterSettingsDef.psf file from Analyst Data\Projects\API
Instrument\Parameter Settings.
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•
Crono_ADC.tun from Analyst Data\Projects\API
Instrument\Preferences.
•
Tunedata.tun file from Analyst Data\Projects\API
Instrument\Preferences (copy only if you want to maintain the
custom reference tables)
•
Any user-created acquisition data, methods, batches, templates,
project folders, drivers (AAO), companion software and any other
data or program as needed.
2.
Back up .lic files for all the other software on the computer on an external
hard disk.
3.
Re-image the Dell Precision T3600 computers with Windows 7 (32-bit)
operating system to Windows 7 (64-bit) operating system. Refer to
Re-image Dell Precision T3600 Computers with Windows 7
(32-bit) Operating System to Windows 7 (64-bit) Operating
System.
4.
Install the Analyst TF 1.7.1 software. Refer to Install Analyst® TF 1.7.1
Software.
5.
Install Instrument-Specific Settings. Refer to Install Instrument-Specific
Settings.
6.
Install Analyst TF Project folders (not API Instrument folder), customer
data and applications, AAO Programs, and so on as needed.
7.
Confirm that the Analyst TF 1.7.1 software and instrument-Specific settings
installed correctly. Refer to Confirm that the Analyst® TF 1.7.1
Software and Instrument-Specific Settings Installed Correctly.
Re-image Dell Precision T3600 Computers with Windows 7 (32-bit)
Operating System to Windows 7 (64-bit) Operating System
To upgrade to the Windows 7 (64-bit) OS, re-image the existing Dell Precision
T3600 acquisition and processing workstations to Windows 7 (64-bit) OS from
Windows 7 (32-bit) OS. Use the following procedure:
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CAUTION: Potential System Damage. The following steps must
be performed by a SCIEX Field Service Employee. Please contact
your SCIEX Sales or Service Representative to help you with the
upgrade. Additional service costs might apply.
Required Materials
•
SCIEX Recovery Activation Tool – T3600 PC and TripleTOF 6600
Instrument (not included with the shipping computer.)
•
T3600 Windows 7 (64-bit) Image
CAUTION: Potential Data Loss. Make sure that you have backed
up all of the important information listed in the step to back
up all the important information. This is very important because
after the following steps are performed, all of the data on the
C: drive will be permanently deleted when Option 1 is selected
in step 5.
1.
Turn on the computer.
2.
During the restart, insert the SCIEX Recovery Activation Disc into the CD
ROM drive.
The CD runs automatically during restart.
3.
Press F12 during the startup.
4.
In the bootup screen, choose bootup from CD/DVD.
CAUTION: Potential Data Loss. Make sure that you have
backed up all of the important information listed in the
step to back up all the important information. This is very
important because after the following steps are
performed, all of the data on the C: drive will be
permanently deleted when Option 1 is selected in step 5.
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5.
In the setup screen for the SCIEX Recovery Activation Disc, select Load
C: drive image from Recovery drive. (Option 1).
6.
Follow the on-screen instructions to set up the appropriate operating
system.
7.
After the re-imaging is complete, restart the computer.
8.
Install the Edgeport driver 5.7 from the Analyst TF 1.7.1 installation DVD.
Refer to Install the Edgeport Driver.
Install Instrument-Specific Settings
From the backup created in the first step, copy the following files and paste them
in the appropriate locations in the Analyst Data folder.
1.
Copy the InstrumentData.ins file and paste it into the Analyst
Data\Projects\API Instrument\Instrument Data folder. Then select Yes to
overwrite the existing file.
2.
Copy the backed up ParameterSettingsDef.psf file and paste it into
the Analyst Data\Projects\API Instrument\Parameter Settings folder. Then
select Yes to overwrite the existing file.
3.
(Only applicable to TripleTOF 6600 system) Copy the
Crono_ADC.tun and paste it into the Analyst Data\Projects\API
Instrument\Preferences folder. Then select Yes to overwrite the existing
file.
4.
(Only applicable to TripleTOF 5600/5600+ and 4600 systems)
Copy the five backed up .txt files (CronoCal_x, x=0,1,3,5,7) and paste
them into Analyst Data\Projects\API Instrument\Preferences
5.
Perform this step only if you want to maintain your custom
reference tables. Copy the backed up Tunedata.tun file and paste
it into the Analyst Data\Projects\API Instrument\Preferences folder. Then
select Yes to overwrite the existing file.
Confirm that the Analyst® TF 1.7.1 Software and Instrument-Specific
Settings Installed Correctly
To perform the channel alignment routine, either use your own tuning solution
or use the Tuning Solution for positive mode and POS PPG 1E-4M for negative
mode.
1.
Infuse a solution.
2.
Run a TOF scan.
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3.
Confirm that a stable signal is present.
4.
Run Instrument Optimization. Only perform the Channel
Alignment Routine at this time. This needs to be done for both
positive and negative modes. A different solution might be required to
execute the channel alignment routine for the other polarity. In the
negative mode, use the default reference table.
5.
Confirm that the instrument performance is as expected using the baseline
data that was collected.
Upgrade to Analyst® TF 1.7.1 on Windows 7 (32-bit) Operating System
If users have Analyst TF 1.7 software installed on a Dell Precision T3600 computer
with Windows 7 (32-bit) operating system and they want to upgrade to Analyst
TF 1.7.1 software, then use the following procedure:
1.
Deactivate the hardware profile.
2.
Close the Analyst TF software.
3.
(Only applicable to T3600 computer) Remove the old ADC driver.
Refer to Remove the Old ADC Driver.
4.
(Only applicable to T3600 computer) Install the new ADC driver
from the Analyst TF 1.7.1 installation DVD. Refer to the Install the
Cronologic ADC Driver.
5.
If the Waters Acquity driver is installed on the computer or
was previously installed on the computer and then removed,
then the computer must be restarted.
6.
Install the Analyst TF 1.7.1 software. Refer to Install Analyst® TF 1.7.1
Software.
Analyst® TF 1.7.1 Software Installation for
TripleTOF® 5600, 5600+, or 4600 Mass Spectrometer
In case of TripleTOF 5600, 5600+, or 4600 mass spectrometer, the Analyst TF
1.7.1 software can be installed on computers with Windows 7 (64-bit) and
Windows 7 (32-bit) operating systems in following ways:
•
Fresh installation without any previous version of the Analyst TF software
installed.
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•
Upgrade to Analyst TF 1.7.1 software from existing Analyst TF 1.7 software.
New Customers: Fresh Installation of Analyst® TF 1.7.1 on Windows
7 (64-bit) Operating System
If users wants to freshly install the Analyst TF 1.7.1 software on a Dell Optiplex
XE2 computer that came with Windows 7 (64-bit) OS, then use the following
procedure.
1.
Install the new TDC driver. Refer to Install the Cronologic HPTDC
TDC Driver.
2.
Install the Edgeport driver 5.7 from the Analyst TF 1.7.1 installation DVD.
Refer to Install the Edgeport Driver.
3.
Install the Analyst TF 1.7.1 software. Refer to Install Analyst® TF 1.7.1
Software.
Install the Cronologic HPTDC TDC Driver
1.
Log on to the computer as a user with Windows local administrator
privileges.
2.
Insert the Analyst TF 1.7.1 Software DVD in the DVD drive of the computer.
3.
Navigate to the Drivers\Cronologic folder on the DVD.
4.
Locate the TDC driver and double-click the
HPTDC8_driver_v3.5.2_a.exe file.
5.
Follow the on-screen instructions to install the driver.
New Customers: Fresh Installation of Analyst® TF 1.7.1 on Windows
7 (32-bit) Operating System
If users wants to freshly install the Analyst TF 1.7.1 software on a Dell Optiplex
XE2 computer that came with Windows 7 (64-bit) OS but want to use Windows
7 (32-bit) operating system (OS), then use the following procedure.
1.
Re-image the Windows 7 (64-bit) Dell Optiplex XE2 computer to Windows
7 (32-bit) OS. Refer to Re-image Dell Optiplex XE2 Computer
with Windows 7 (64-bit) Operating System to Windows 7
(32-bit) Operating System
2.
Uninstall the old Cronologic HPTDC TDC driver using the Control Panel.
3.
Install the new TDC driver. Refer to Install the Cronologic HPTDC
TDC Driver.
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4.
Install the Edgeport driver 5.7 from the Analyst TF 1.7.1 installation DVD.
Refer to Install the Edgeport Driver.
5.
Install the Analyst TF 1.7.1 software. Refer to Install Analyst® TF 1.7.1
Software.
Re-image Dell Optiplex XE2 Computer with Windows 7 (64-bit)
Operating System to Windows 7 (32-bit) Operating System
CAUTION: Potential System Damage. We strongly recommend
that the following steps are performed by a SCIEX Field Service
Employee. Please contact your SCIEX Sales or Service
Representative to help you with the upgrade. Additional service
costs might apply.
Required Materials
SCIEX Recovery Activation Disc: This disc was provided with the Dell Optiplex
XE2 computer.
1.
Turn on the computer.
2.
During the restart, insert the SCIEX Recovery Activation Disc into the CD
ROM drive.
The CD runs automatically during restart.
3.
Press F12 during the startup.
4.
In the bootup screen, choose bootup from CD/DVD Drive.
5.
In the setup screen for the SCIEX Recovery Activation Disc, select Load
C: drive image from Recovery drive. (Option 1).
6.
Follow the on-screen instructions to set up the appropriate operating
system.
7.
After the re-imaging is complete, restart the computer.
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Existing Analyst TF 1.6 Software Customers: Upgrade to Analyst TF
1.7.1 Software
•
Users who are using the Analyst TF 1.6 software on a Dell Precision T3500
computer with Windows XP operating system need to purchase a new
Dell Optiplex XE2 computer from SCIEX in order to upgrade to the Analyst
TF 1.7.1 software. Refer to Purchase a New Dell Optiplex 9010
Computer with MS Windows 7 (64-bit) Operating System.
•
Users who are using the Analyst TF 1.6 software on a Dell Optiplex 9010
computer with Windows XP operating system and want to upgrade to
Analyst TF 1.7.1 software on a Windows 7 (64-bit), refer to Upgrade to
Analyst® TF 1.7.1 Software on a Windows 7 (64-bit)
Operating System.
•
Users who are using the Analyst TF 1.6 software on a Dell Optiplex 9010
computer with Windows XP operating system and want to upgrade to
Analyst TF 1.7.1 software on a Windows 7 (32-bit), refer to Upgrade to
Analyst® TF 1.7.1 Software on a Windows 7 (32-bit)
Operating System on a Dell Optiplex Computer.
Purchase a New Dell Optiplex XE2 Computer with MS Windows 7
(64-bit) Operating System
If you are using the Analyst TF 1.6 software on a Dell Precision T3500 computer
with Windows XP operating system, then in order to upgrade to the Analyst TF
1.7.1 software, purchase a new Dell Optiplex XE2 computer from SCIEX.
The Dell Optiplex XE2 computer comes with the Windows 7 (64-bit) operating
system.
After a new Dell Optiplex XE2 computer is purchased, perform the following
steps:
Note: Before installing the Analyst TF 1.7.1 software, determine the
performance level of the mass spectrometer by creating a set of baseline data.
To create a set of baseline data, create a .wiff file for each scan type (Q1, TOF
MS, TOF MSMS) for each polarity. You can use the Tuning Solution for positive
mode and Taurocholic acid 2 ng/μL for negative mode. This baseline data will
be used to confirm the instrument performance after the installation of the
Analyst TF 1.7.1 software.
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CAUTION: Potential System Damage. We strongly recommend
that the following steps are performed by a SCIEX Field Service
Employee. Please contact your SCIEX Sales or Service
Representative to help you with the upgrade. Additional service
costs might apply.
1.
Back up all the important information from your T3500 computer on an
external hard disk or on the network. Back up the following:
•
InstrumentData.ins file from Analyst Data\Projects\API
Instrument\Instrument Data.
•
ParameterSettingsDef.psf file from Analyst Data\Projects\API
Instrument\Parameter Settings.
•
Five .txt files (CronoCal_x, x=0,1,3,5,7) from Analyst
Data\Projects\API Instrument\Preferences
•
Tunedata.tun file from Analyst Data\Projects\API
Instrument\Preferences (copy only if you want to maintain the
custom reference tables)
•
Any user-created acquisition data, methods, batches, templates,
project folders, drivers (AAO), companion software and any other
data or program as needed.
2.
Back up .lic files for all the other software on the computer on an external
hard disk.
3.
When the new computer is turned on for the first time, the Windows setup
wizard opens and prompts the user to set up the Windows environment.
Follow the instructions to set up generic Windows items such as the
account name and password, date, and time zone.
After the setup is complete, the computer restarts automatically.
4.
Remove the Cronologic HPTDC TDC Card from your Dell T3500 Computer.
This step is only required if you are upgrading your computer to the
Windows 7 OS and you were using a Dell Optiplex T3500 computer with
Windows XP OS. Refer to Remove the Cronologic HPTDC TDC
Card.
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5.
Install the Cronologic HPTDC TDC Card from the T3500 computer in the
new Dell Optiplex XE2 computer you purchased. Refer to Install the
Cronologic HPTDC TDC Card.
6.
Install the new TDC driver. Refer to Install the Cronologic HPTDC
TDC Driver.
7.
Install the Edgeport driver 5.7 from the Analyst TF 1.7.1 installation DVD.
Refer to Install the Edgeport Driver.
8.
Install the Analyst TF 1.7.1 Software. Refer to Install Analyst® TF 1.7.1
Software.
9.
Install Instrument-Specific Settings. Refer to Install Instrument-Specific
Settings.
10.
Install Analyst TF Project folders (not API Instrument folder), customer
data and applications, AAO Programs, and so on as needed.
11.
Update the firmware and configuration tables. Refer to Update the
Firmware and Configuration Tables.
12.
Confirm that the Analyst TF 1.7.1 software and instrument-Specific settings
installed correctly. Refer to Confirm that the Analyst® TF 1.7.1
Software and Instrument-Specific Settings Installed Correctly.
Remove the Cronologic HPTDC TDC Card
CAUTION: Potential System Damage: Make sure that you are
electrically grounded. Wear a grounded wrist strap when
handling this component.
Required Materials
ESD wrist strap and mat
1.
Turn off the computer and then unplug the power cable from the AC mains
supply outlet.
2.
Disconnect the TDC instrument cable from the computer. Disconnect any
other cables as needed.
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3.
Pull the release mechanism located at the top back of the computer toward
the back of the computer.
The right side panel opens at the top.
4.
Remove the right side panel.
5.
Open the blue retaining arm that is hinged on the back wall of the
computer, and then squeeze the blue handle that locks access to the
computer card slots.
6.
Remove the TDC card located in the fifth slot.
Install the Cronologic HPTDC TDC Card
CAUTION: Potential System Damage: Make sure that you are
electrically grounded. Wear a grounded wrist strap when
handling this component.
Required Materials
ESD wrist strap and mat
1.
Remove the cover panel on the left side of the Dell Optiplex XE2 computer.
2.
Lift the retaining arm that secures the cards in the slots, and then remove
the slot cover from slot 3 (the second slot from the bottom).
3.
Insert the TDC card into slot 3, making sure that it is fully inserted into
the PCI connector.
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Figure 3-1 TDC Card Installed, Interior View
4.
Install the retaining arm by snapping it back into place.
5.
Install the cover panel.
Figure 3-2 TDC Card Installed, Exterior View
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Item
6.
Description
1
Slot 1—Ethernet
2
Slot 2—Empty
3
Slot 3—TDC card
4
Slot 4—Ethernet
Go to Install Cronologic HPTDC TDC Driver.
Update the Firmware and Configuration Tables
Use the Firmware/Configuration Table Update program to automatically determine
if either firmware or configuration tables must be updated on the system. The
utility performs only the necessary updates. The utility might also reset the mass
spectrometer system controller. This is normal and is required by the update
process.
Before running this utility, make sure that the mass spectrometer is on and the
GPIB driver software is properly installed.
1.
Navigate to the location where the contents of the Analyst TF 1.7 software
package was unzipped.
2.
Browse to \Extras\ConfigUpdater folder and then double-click
ConfigUpdater.exe.
The Configuration Update Program page opens.
Figure 3-3 Select Interface Dialog
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3.
Click GPIB (System Controller).
4.
Click OK.
The Configuration Update Program identifies the new firmware version it
will install.
Figure 3-4 Firmware/Configuration Table Update Program
Dialog
5.
Click Next.
A message box prompting users to click the OK button to start the
uploading the new firmware is shown.
Figure 3-5 Message Box
6.
Click OK to start the upload.
The ConfigUpdater program starts uploading the new firmware.
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Figure 3-6 Firmware/Configuration Table Update Program
Dialog
7.
After step 5 starts, wait for 10 minutes.
Note: During the firmware upload process, a message (Figure 3-7)
is shown indicating that the mass spectrometer (system controller) will
be reset. Do not click OK in the message until 10 minutes have
elapsed from the start of step 5.
Figure 3-7 Mass Spectrometer Reset Message
8.
Click OK. Wait for two minutes.
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Note: After you click OK, the ConfigUpdater program
advances to the next dialog (Figure 3-8). DO NOT
CONTINUE WITH THIS DIALOG UNTIL THE MASS
SPECTROMETER RESET PROCESS IS COMPLETED IN 9.
Figure 3-8 Firmware/Configuration Table Update Program
Dialog
9.
If the MIL3000 firmware is being used, then manually reset the mass
spectrometer (power off, wait for 10 seconds, power back on). Then wait
30 seconds for the mass spectrometer to power on. For other firmware,
the mass spectrometer is reset automatically.
10.
After the mass spectrometer reset is complete, click Next in Figure 3-8
to re-run Configuration Updater to upgrade the Configuration Table.
After the Configuration Table is upgraded, the message (Figure 3-7) to
reset the mass spectrometer is displayed.
11.
Click OK.
The mass spectrometer resets itself.
The Firmware/Configuration Table Uploaded Successfully message is
shown.
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12.
Click Finish to complete the Configuration Table upgrade.
Note: If the Firmware/Configuration Table Uploaded
Successfully dialog is shown along with another dialog (refer to
Figure 3-9), ignore the other dialog and then click Finish in the
Firmware/Configuration Table Uploaded Successfully
dialog to complete the upgrade process.
Figure 3-9 Firmware/Configuration Table Uploaded
Successfully Dialog
13.
After the mass spectrometer reset is complete, start the Analyst TF
software. Create and activate an instrument hardware profile from the
Hardware Configuration Editor.
Upgrade to Analyst® TF 1.7.1 Software on a Windows 7 (64-bit)
Operating System
If the user has Analyst TF 1.6 software on a Dell Optiplex 9010 computer with
Windows XP operating system and wants to upgrade to Analyst TF 1.7.1 software
on a Windows 7 (64-bit) operating , use the following procedure:
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Note: Before installing the Analyst TF 1.7.1 software, determine the
performance level of the mass spectrometer by creating a set of baseline data.
To create a set of baseline data, create a .wiff file for each scan type (Q1, TOF
MS, TOF MSMS) for each polarity. You can use the Tuning Solution for positive
mode and Taurocholic acid 2 ng/μL for negative mode. This baseline data will
be used to confirm the instrument performance after the installation of the
Analyst TF 1.7.1 software.
Note: To install the Analyst TF 1.7.1 software, you must have Administrator
privileges on the workstation.
Follow all the steps listed below in the same sequence as they are shown in
this document to successfully install the Analyst TF 1.7.1 software. Steps 1 to 6
are necessary. Each step is explained on the following pages and must be followed
as described:
CAUTION: Potential System Damage. The following steps must
be performed by a SCIEX Field Service Employee. Please contact
your SCIEX Sales or Service Representative to help you with the
upgrade. Additional service costs might apply.
1.
It is critical that you back up all of the important information
on an external hard disk or on the network before installing the Analyst
TF 1.7.1 software. Back up the following:
•
InstrumentData.ins file from Analyst Data\Projects\API
Instrument\Instrument Data.
•
ParameterSettingsDef.psf file from Analyst Data\Projects\API
Instrument\Parameter Settings.
•
Five .txt files (CronoCal_x, x=0,1,3,5,7) from Analyst
Data\Projects\API Instrument\Preferences
•
Tunedata.tun file from Analyst Data\Projects\API
Instrument\Preferences (copy only if you want to maintain the
custom reference tables)
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•
Any user-created acquisition data, methods, batches, templates,
project folders, drivers (AAO), companion software and any other
data or program as needed.
2.
Re-image existing Dell Optiplex 9010 computer with Windows XP operating
system to Windows 7 (64-bit) operating system. Refer to Re-image the
Current Dell Optiplex XE2 or 9010 computer with Windows
7 (32-bit) Operating System to Windows 7 (64-bit) Operating
System.
3.
Install the new TDC driver. Refer to Install the Cronologic HPTDC
TDC Driver.
4.
Install the Edgeport driver 5.7 from the Analyst TF 1.7.1 installation DVD.
Refer to Install the Edgeport Driver.
5.
Install the Analyst TF 1.7.1 software. Refer to Install Analyst® TF 1.7.1
Software.
6.
Update the firmware and configuration tables. Refer to Update the
Firmware and Configuration Tables.
7.
Install Instrument-Specific Settings. Refer to Install Instrument-Specific
Settings.
8.
Install Analyst TF Project folders (not API Instrument folder), customer
data and applications, AAO Programs, and so on as needed.
9.
Confirm that the Analyst TF 1.7.1 software and instrument-Specific settings
installed correctly. Refer to Confirm that the Analyst® TF 1.7.1
Software and Instrument-Specific Settings Installed Correctly.
Existing Analyst TF 1.7 Software Customers: Upgrade to Analyst TF
1.7.1 Software
Users who are using Analyst TF 1.7 software on Windows 7 (32-bit) operating
system on a Dell Optiplex XE2 or 9010 computer can upgrade to Analyst TF 1.7.1
software in following ways:
•
Upgrade to Analyst TF 1.7.1 software on Windows 7 (64-bit) operating
system on a Dell Optiplex XE2 or 9010 computer
•
Upgrade to Analyst TF 1.7.1 software on Windows 7 (32-bit) operating
system on a Dell Optiplex XE2 or 9010 computer
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Upgrade to Analyst® TF 1.7.1 Software on a Windows 7 (64-bit)
Operating System
If the user has Analyst TF 1.7 software on a Windows 7 (32-bit) operating system
on a Dell Optiplex XE2 or 9010 computer and wants to upgrade to Analyst TF
1.7.1 software on a Windows 7 (64-bit) operating , use the following procedure:
Note: Before installing the Analyst TF 1.7.1 software, determine the
performance level of the mass spectrometer by creating a set of baseline data.
To create a set of baseline data, create a .wiff file for each scan type (Q1, TOF
MS, TOF MSMS) for each polarity. You can use the Tuning Solution for positive
mode and Taurocholic acid 2 ng/μL for negative mode. This baseline data will
be used to confirm the instrument performance after the installation of the
Analyst TF 1.7.1 software.
Note: To install the Analyst TF 1.7.1 software, you must have Administrator
privileges on the workstation.
Follow all the steps listed below in the same sequence as they are shown in
this document to successfully install the Analyst TF 1.7.1 software. Steps 1 to 6
are necessary. Each step is explained on the following pages and must be followed
as described:
CAUTION: Potential System Damage. We strongly recommend
that the following steps are performed by a SCIEX Field Service
Employee. Please contact your SCIEX Sales or Service
Representative to help you with the upgrade. Additional service
costs might apply.
1.
It is critical that you back up all of the important information
on an external hard disk or on the network before installing the Analyst
TF 1.7.1 software. Back up the following:
•
InstrumentData.ins file from Analyst Data\Projects\API
Instrument\Instrument Data.
•
ParameterSettingsDef.psf file from Analyst Data\Projects\API
Instrument\Parameter Settings.
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•
Five .txt files (CronoCal_x, x=0,1,3,5,7) from Analyst
Data\Projects\API Instrument\Preferences
•
Tunedata.tun file from Analyst Data\Projects\API
Instrument\Preferences (copy only if you want to maintain the
custom reference tables)
•
Any user-created acquisition data, methods, batches, templates,
project folders, drivers (AAO), companion software and any other
data or program as needed.
2.
Re-image existing Dell Optiplex XE2 or 9010 computer with Windows
7(32-bit) operating system to Windows 7 (64-bit) operating system. Refer
to Re-image the Current Dell Optiplex XE2 or 9010 computer
with Windows 7 (32-bit) Operating System to Windows 7
(64-bit) Operating System.
3.
Install the new TDC driver. Refer to Install the Cronologic HPTDC
TDC Driver.
4.
Install the Edgeport driver 5.7 from the Analyst TF 1.7.1 installation DVD.
Refer to Install the Edgeport Driver.
5.
Install the Analyst TF 1.7.1 software. Refer to Install Analyst® TF 1.7.1
Software.
6.
Install Instrument-Specific Settings. Refer to Install Instrument-Specific
Settings.
7.
Install Analyst TF Project folders (not API Instrument folder), customer
data and applications, AAO Programs, and so on as needed.
8.
Confirm that the Analyst TF 1.7.1 software and instrument-Specific settings
installed correctly. Refer to Confirm that the Analyst® TF 1.7.1
Software and Instrument-Specific Settings Installed Correctly.
Re-image the Current Dell Optiplex XE2 or 9010 computer with
Windows 7 (32-bit) Operating System to Windows 7 (64-bit) Operating
System
To upgrade to the Windows 7 (64-bit) OS, re-image the existing Dell Optiplex
XE2 or 9010 acquisition and processing workstations to Windows 7 (64-bit) OS
from Windows 7 (32-bit) (or Windows XP) OS . Use the following procedure:
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Installation Instructions
CAUTION: Potential System Damage. We strongly recommend
that the following steps are performed by a SCIEX Field Service
Employee. Please contact your SCIEX Sales or Service
Representative to help you with the upgrade. Additional service
costs might apply.
Required Materials
SCIEX Recovery Activation Disc. This disc was provided with the Dell Optiplex
XE2 or 9010 computer.
CAUTION: Potential Data Loss. Make sure that you have backed
up all of the important information listed in the step to back
up all the important information. This is very important because
after the following steps are performed, all of the data on the
C: drive will be permanently deleted when Option 1 is selected
in step 5.
1.
Turn on the computer.
2.
During the restart, insert the SCIEX Recovery Activation Disc into the CD
ROM drive.
The CD runs automatically during restart.
3.
Press F12 during the startup.
4.
In the bootup screen, choose bootup from CD/DVD.
CAUTION: Potential Data Loss. Make sure that you have
backed up all of the important information listed in the
step to back up all the important information. This is very
important because after the following steps are
performed, all of the data on the C: drive will be
permanently deleted when Option 1 is selected in step 5.
5.
In the setup screen for the SCIEX Recovery Activation Disc, select Load
C: drive image from Recovery drive. (Option 1).
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Installation Instructions
6.
Follow the on-screen instructions to set up the appropriate operating
system.
7.
After the re-imaging is complete, restart the computer.
Upgrade to Analyst® TF 1.7.1 Software on a Windows 7 (32-bit)
Operating System on a Dell Optiplex Computer
If users are using Analyst TF 1.7 software on a Dell Optiplex computer (XE2 or
9010) with Windows 7 (32-bit) OS and need to upgrade to Analyst TF 1.7.1
software, then use the following procedure:
Note: This procedure can also be used by users who are using the Analyst TF
1.6 software on a Dell Optiplex 9010 computer with Windows XP operating
system and want to upgrade to Analyst TF 1.7.1 software on a Windows 7
(32-bit).
1.
Back up the following on an external hard disk or on the network before
upgrading to the Analyst TF 1.7.1 software:
•
InstrumentData.ins file from Analyst Data\Projects\API
Instrument\Instrument Data.
•
ParameterSettingsDef.psf file from Analyst Data\Projects\API
Instrument\Parameter Settings.
•
Five .txt files (CronoCal_x, x=0,1,3,5,7) from Analyst
Data\Projects\API Instrument\Preferences
•
Tunedata.tun file from Analyst Data\Projects\API
Instrument\Preferences (copy only if you want to maintain the
custom reference tables)
2.
Deactivate the hardware profile.
3.
Close the Analyst TF software.
4.
Uninstall the old Cronologic HPTDC TDC driver using the Control Panel.
5.
Install the new TDC driver. Refer to Install the Cronologic HPTDC
TDC Driver.
6.
Install the Edgeport driver 5.7 from the Analyst TF 1.7.1 installation DVD.
Refer to Install the Edgeport Driver.
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Installation Instructions
7.
If the Waters Acquity driver is installed on the computer or
was previously installed on the computer and then removed,
then the computer must be restarted.
8.
Install the Analyst TF 1.7.1 software. Refer to Install Analyst® TF 1.7.1
Software.
(Optional) Install Scripts
•
A number of research-grade scripts are available to extend the functionality
of the Analyst TF software. Refer to the Scripts User Guide found in
the Start Menu: All Programs > SCIEX > Analyst TF > Software
Guides folder.
(Optional) Install PeakView® 2.2 Software
®
®
Install the PeakView 2.2 software from the Analyst TF 1.7.1 software DVD.
You will need a license to use the PeakView 2.2 software. Use the link
https://licensing.sciex.com/download/index to get a trial license. If you already
had the license file, then use that file.
1.
Navigate to the Extras\PeakView 2.2 folder on the DVD.
2.
Double-click PeakView_2.2.exe and extract the contents of this
self-extracting executable to the C:\ drive.
3.
Follow the on-screen instructions.
Run the Software for the First Time
®
1.
Start the Analyst TF 1.7.1 software by double-clicking the icon on the
desktop.
2.
(For acquisition workstations) Configure and then activate a hardware
profile. Test the software to make sure that you can acquire data or process
data.
Register the Software
Ten days from the date of installation, the software prompts you to register the
®
Analyst TF 1.7.1 software online. This online registration helps us to offer better
support, and allows for easier notification about the availability of upgrades and
patches, as well as other software-related information.
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Installation Instructions
After you install the Analyst TF 1.7.1 software, register the installation online
at: http://discoversciex.com/LP=3288.
Register from any computer. It does not have to be the computer on which the
software is installed. Your name and email address, and the name, address, and
telephone number of the company licensing the software are required. Optional
information includes some brief questions on how the Analyst TF software is used
at the site, plus a section for comments. You can choose whether to be contacted
for software updates, product information, or electronic surveys. Review the
privacy statement and contact information on the Web site for details about the
information collected and its usage.
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Firmware and Configuration
Tables Files
A
The following instrument firmware and configuration table versions must be used
®
with the Analyst TF 1.7.1 software. These tables are for reference purposes only.
Table A-1 Configuration table and firmware files
Instrument
Configuration table Firmware
file
®
TripleTOF 4600 system D2988101.fw
MIL4000
TripleTOF 5600 system
M3L2003 (for 332 Main);
C7600802.fw
M402001 (for 340 Main)
TripleTOF 5600+ system C7600802.fw
MIL4000
TripleTOF 5600+ system C7600811.fw
TM
with SelexION
Technology
MIL4000
TripleTOF 6600 system
D2988300.fw
MIL4000
TripleTOF 6600 system
TM
with SelexION
Technology
D2988300.fw
MIL4000
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Peripheral Devices and
Firmware
B
®
The Analyst TF 1.7.1 software supports the devices listed in the following table.
Firmware versions that have been fully qualified with the Analyst TF 1.7.1 software
are listed without parentheses. Versions shown in parentheses have functioned
acceptably in more limited testing.
In most cases, more recent firmware versions from the device manufacturer will
work with the Analyst TF 1.7.1 software. If you encounter difficulties, change the
device firmware to the version listed in this table. For information on checking
and upgrading firmware, refer to the documentation provided by the device
manufacturer. For information on installation and configuration of devices, refer
to the Peripheral Devices Setup Guide.
Table B-1 Eksigent
Peripheral device
Tested firmware
(and other
firmware)
Communication
cable required
ekspert™ ultraLC 100
Autosampler
(1.29 or higher)
WC024736 (RS-232
cable)
ekspert ultraLC 100-XL
Autosampler
(1.02 or higher)
WC024736 (RS-232
cable)
ekspert ultraLC 100
Pump
(1.12 or higher)
—
ekspert ultraLC 100
Column Oven
(2.04 or higher)
—
Eksigent Ultra 2D+
(2.45)
—
Eksigent Ultra 2D
(2.46)
—
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Peripheral Devices and Firmware
Table B-2 Agilent 1290
Peripheral
device
Model
Tested firmware
(and other
firmware)
Communication
cable
required
Binary Pump
G4220A
(B.06.32, A.06.55,
B.06.30)
WC024736
(RS-232 cable)
or Ethernet
Standard
Autosampler
G4226A
(A.06.32, A.06.54,
A.06.30)
WC024736 or
Ethernet
Column Oven
G1316C
(A.06.32, A.06.30)
WC024736
DAD
G4212A
(B.06.32, B.06.30)
Ethernet
Table B-3 Agilent 1260
Peripheral
device
Model
Tested firmware
(and other
firmware)
Communication
cable
required
Isocratic Pump
G1310B
(A.06.32)
WC024736 or
Ethernet
Quaternary
Pump
G1311B
(A.06.32)
WC024736 or
Ethernet
Binary Pump
G1312B
(A.06.32)
WC024736 or
Ethernet
Standard
Autosampler
G1329B
(A.06.32, A.06.54)
WC024736 or
Ethernet
High
Performance
Autosampler
G1367E
A.06.54,(A.06.32)
WC024736 or
Ethernet
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Peripheral Devices and Firmware
Table B-3 Agilent 1260 (continued)
Peripheral
device
Model
Tested firmware
(and other
firmware)
Communication
cable
required
TCC—
Thermostatted
Column
Compartment
G1316A
(A.06.32)
WC024736
DAD—Diode
Array Detector
G4212B
(B.06.32)
Ethernet
Table B-4 Agilent 1200
Peripheral device
Tested firmware
(and other
firmware)
Communication
cable required
Isocratic Pump
(A.06.32, A.06.02)
WC024736 (RS-232
cable) or Ethernet
Quaternary Pump
(A.06.32, A.06.02)
WC024736 or Ethernet
Binary Pump
A.06.53, (A.06.32,
A.06.04, A.06.02)
WC024736 or Ethernet
Binary SL Pump
(A.06.32, A.06.53,
A.06.04, A.06.02)
WC024736 or Ethernet
Capillary Pump
(A.06.32, A.06.02)
WC024736 or Ethernet
Nanoflow Pump
(A.06.32, A.06.02)
WC024736 or Ethernet
Standard Autosampler
(A.06.32, A.06.54,
A.06.10)
WC024736 or Ethernet
High Performance
Autosampler
(A.06.32, A.06.54,
A.06.04, A.06.02)
WC024736 or Ethernet
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Peripheral Devices and Firmware
Table B-4 Agilent 1200 (continued)
Peripheral device
Tested firmware
(and other
firmware)
Communication
cable required
High Performance
Autosampler SL
(A.06.32, A.06.54)
WC024736 or Ethernet
Micro Well-plate
Autosampler
(A.06.32, A.06.02)
WC024736 or Ethernet
High Performance
Autosampler SL Plus
A.06.54,(A.06.32)
WC024736 or Ethernet
TCC—Thermostatted
Column Compartment
(A.06.32, A.06.02)
WC024736 or Ethernet
TCC SL—Thermostatted (A.06.32, A.06.02)
Column Compartment
WC024736 or Ethernet
DAD—Diode Array
Detector
B.06.53, (B.06.32,
A.06.32, A.06.02)
WC024736 or Ethernet
DAD SL—Diode Array
Detector SL
(B.06.32, B.01.02)
Ethernet
Table B-5 Agilent 1100
Peripheral device
Tested firmware
(and other
firmware)
Communication
cable required
Binary Pump
(A.06.10, A.05.11,
A.05.06, 4.11)
WC024736* (RS-232
cable), WC021365 (GPIB
cable), or Ethernet
Quarternary Pump
(A.06.10, 5.04, A.05.11, WC024736, WC021365,
A.04.11)
or Ethernet
Isocratic Pump
(A.06.10, A.04.11)
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WC024736, WC021365,
or Ethernet
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Peripheral Devices and Firmware
Table B-5 Agilent 1100 (continued)
Peripheral device
Tested firmware
(and other
firmware)
Communication
cable required
Capillary Pump
(A.06.30, A.04.11)
WC024736, WC021365,
or Ethernet
Nano Pump
(A.06.30, A.05.06, 5.05, WC024736, WC021365,
5.04)
or Ethernet
Standard Autosampler
(A.06.10, A.05.11, 5.04, WC024736, WC021365,
A.04.10)
or Ethernet
Micro Autosampler
(A.06.10, A.05.04, 4.10) WC024736, WC021365,
or Ethernet
Well-plate Autosampler
(A.06.31, A.05.07, 4.14, WC024736, WC021365,
5.02)
or Ethernet
Micro Well-plate
Autosampler
(A.06.31, A.05.09, 4.14) WC024736, WC021365,
or Ethernet
Thermostatted Column
Compartment
(A.06.10, A.05.06, 5.05, WC024736, WC021365,
4.11)
or Ethernet
DAD – Diode Array
Detector
(B.06.30, A.06.10, 5.09, WC024736, WC021365,
A.05.06, 4.11)
or Ethernet
DAD – Diode Array
Detector SL
(B.06.30, B.01.01)
WC024736, WC021365,
or Ethernet
* WC024736 is a Standard Null Modem cable DB9/DB9 female
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Peripheral Devices and Firmware
Table B-6 CTC
Peripheral device
Tested firmware
(and other
firmware)
Communication
cable required
HTS PAL Autosampler
(4.2, 4.1.x, 2.4.0)
WC024736
HTC PAL Autosampler
(4.2, 4.1.x, 2.4.0)
WC024736
LC PAL Autosampler
(4.2, 4.1.x, 2.4.0, 2.3.1)
WC024736
DLW (HTC-XT)
(4.2.0, 4.1.x and Rev 5
cycle files)
WC024736 or Ethernet
Peripheral device
Tested firmware
(and other
firmware)
Communication
cable required
215 Autosampler
(2.20)
WC024735**
with 819 Valve
(1.00)
Gilson GSIOC
233 Autosampler
(BV1.11)
WC024735
with 402 Syringe
(SV1.10, SV2.3)
Gilson GSIOC
Table B-7 Gilson
** WC024735 is a Standard Modem cable DB25 male/DB9 female.
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Peripheral Devices and Firmware
Table B-8 Harvard
Peripheral device
Tested firmware
(and other
firmware)
Communication
cable required
Harvard
(22 Syringe Pump)
22.90
Peripheral device
Tested firmware
(and other
firmware)
Communication
cable required
UltiMate Integrated
System
(5.06, 6.00)
Cables available from LC
Packings
Famos Autosampler
(Well-plate)
(2.02)
Cables available from LC
Packings
Famos Autosampler
(Carousel)
(1.14)
Cables from LC Packings
Table B-9 LC Packings
Table B-10 PE Series 200
Peripheral device
Tested firmware
(and other
firmware)
Communication
cable required
Autosampler
(1.08)
WC024736
Column Oven
(1134)
WC024736
Micro Pump
(2.43)
WC024736
Quaternary Pumps
(2.43)
WC024736
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Peripheral Devices and Firmware
Table B-11 Shimadzu
Peripheral device
Tested firmware
(and other
firmware)
Communication
cable required
SCL-10Avp System
Controller
(5.40, 5.33)
WC024736
SIL-10ADvp Autosampler (5.32)
SIL-HTA Autosampler
(6.02)
SIL-HTC Autosampler
(6.02, 6.03)
SIL-20ACXR Autosampler (1.20, 1.22, 1.23)
All other Shimadzu
devices require 2-pin
optical cables to connect
to the System Controller.
These are available from
Shimadzu.
SIL-20AXR Autosampler (1.20 or later)
SIL-20A Autosampler
—
—
SIL-20AC Autosampler
(1.20)
—
SIL-30AC Autosampler
3.0, (2.01)
—
SIL-30ACMP
Autosampler
(1.03)
—
LC-6AD Pump
(1.4)
—
LC-8A Pump
(1.5)
—
LC-10AD Pump
(3.1)
—
LC-10AS Pump
(3.1)
—
LC-10AT Pump
(3.1)
—
LC-10Ai Pump
(3.1)
—
LC-10ADvp Pump
(5.27, 5.25, 5.26)
—
LC-10ATvp Pump
(5.27)
—
LC-20ADXR Pump
(1.20, 1.21, 1.22 )
—
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Peripheral Devices and Firmware
Table B-11 Shimadzu (continued)
Peripheral device
Tested firmware
(and other
firmware)
Communication
cable required
LC-30AD Pump
3.01, (2.01, 2.1)
—
LC-20AD Solvent
Delivery Unit
(1.10, 1.07, 1.04 or later) —
LC-20AB Binary Solvent
Delivery Unit
—
—
LC-20AT Solvent Delivery —
Unit
—
CTO-10A[C] Column
Oven
(3.0)
—
CTO-10Avp Column
Oven
(5.24)
—
CTO-10ACvp Column
Oven
(5.24)
—
CTO-10ASvp Column
Oven
(5.24)
—
CTO-20A Column Oven
—
—
CTO-20AC Column Oven (1.07, 1.06)
—
CTO-30A Column Oven
—
(3.0, 2.1)
CTO-30AS Column Oven (0.07)
—
SPD-10A Detector
(3.0)
—
SPD-10Ai Detector
(3.0)
—
SPD-10AV Detector
(3.0)
—
SPD-10AVi Detector
(3.0)
—
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Peripheral Devices and Firmware
Table B-11 Shimadzu (continued)
Peripheral device
Tested firmware
(and other
firmware)
Communication
cable required
SPD-10Avp Detector
(5.22)
—
SPD-10AVvp Detector
(5.23, 5.22)
—
SPD-20A UV-VIS
Detector
—
—
SPD-20AV UV-VIS
Detector
(1.03, 1.11 )
—
OptionBox-L
Subcontroller
(3.2)
—
SubcontrollerVP
(5.20)
—
FCV-12AH Valve
N/A
—
FCV-13AL Valve
N/A
—
FCV-14AH Valve
N/A
—
CBM-20 A with Ethernet (1.2.1, 1.30, 2.30, 1.06,
Switch (system controller 1.05 or later)
with 8 fiber optic ports)
—
CBM-20 A Lite with
—
Ethernet Switch (system
controller with 4 fiber
optic ports; installs onto
pump or autosampler)
—
Rack Changer
—
—
Rack Changer C
—
—
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Peripheral Devices and Firmware
Table B-12 Spark Holland
Peripheral device
Tested firmware
(and other
firmware)
Communication
cable required
Endurance Autosampler (2.05)
Requires Analyst
Software Driver Kit p/n
0920-768 from Spark
([email protected])
Symbiosis™ Pico System —
—
Table B-13 Valco
Peripheral device
Tested firmware
(and other
firmware)
Communication
cable required
2 Position Valve
(1-PD-EPX88RL)
—
Peripheral device
Tested firmware
(and other
firmware)
Communication
cable required
Acquity Binary Solvent
Manager
(1.50.1521)
—
Acquity Sample Manager (1.50.2730)
—
Acquity Column
Manager
—
Table B-14 Acquity
1.60, 1.60.2072,
(1.50.1678)
Notes on Firmware for Agilent Users
It is recommended that Agilent users use the most recently distributed firmware
from Agilent. Due to Agilent’s frequent firmware release schedule, SCIEX cannot
test all firmware on all devices in all Analyst TF software versions, but Agilent’s
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Peripheral Devices and Firmware
releases are backward-compatible. If a problem occurs, downgrade the firmware
indicated in the previous tables. Agilent CAN support requires that all firmware
in the CAN-linked stack be of the same major revision (4.×, 5.×, and so on).
Peripheral Devices Controlled via AAO Software
Interface
®
The Analyst Access Object (AAO) is an interface to the Analyst TF 1.7.1 software
that allows device vendors to develop device control software that can be plugged
into the Analyst TF software to enable integrated LC/MS control.
Vendors that have released AAO software are listed below. For additional
information, contact vendors directly.
•
Advion, Inc
•
Alcott Chromatography
•
Cohesive Technologies
•
Dionex Corp.
•
Eksigent Technologies
•
ESA Inc.
•
Flux Instruments AG
•
Jasco Inc.
•
Leap Technologies
•
Maylab Analytical Instruments
•
Shimadzu Corporation
•
Shiseido Co. Ltd.
•
Spark Holland
•
Waters Corp.
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C
Troubleshooting Tips
®
At SCIEX, we are committed to providing the highest level of support for Analyst
TF software users. To obtain answers to questions about any of our products,
report problems, or suggest improvements, visit the Web site at
http://www.sciex.com.
Issue
Possible cause or solution
The installation stops part way through Remove the partially installed software
the process.
using Windows Add/Remove Programs.
Leave the system off for at least 15
seconds after removing the software.
Start the installation by navigating to
the \Install folder on the software DVD,
and then double-clicking the Setup.exe
file.
If you cannot remove the partially
installed software or you still cannot
install the software, contact SCIEX
technical support at www.sciex.com.
The installation seems to be taking a
long time to install.
There might be a large amount of data
in the <drive>:\Analyst
Data\Projects\API Instrument\Data
folder.
Before installing the software, backup
and then delete the contents in
<drive>:\Analyst Data\Projects\API
Instrument\Data folder.
After I install the software and start
the application, I experience a failure
where the event log reports that the
software is unable to open the security
database.
Analyst® TF 1.7.1 Software
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Remove the installed software using
Windows Add/Remove Programs, and
then install the software.
Contact SCIEX technical support at
www.sciex.com to report the error.
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Troubleshooting Tips
Issue
Possible cause or solution
After installing, I cannot log on to the Your user name might not have been
Analyst TF 1.7.1 software.
successfully added to the security
database. Log on to the computer as
the local administrator, and then add
your user name to the Analyst TF 1.7.1
software using the Security
Configuration dialog.
I see the error message “Failed to load
the parameter settings file” when I try
to start a profile in the Analyst TF 1.7.1
software.
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If you restored any files or folders from
a DVD, or copied over files shipped
with your instrument, these files might
be set as read only. To use these files,
remove the read- only setting from the
files using Windows Explorer.
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Intel Dual Port Card
Configuration
D
This section provides the steps to configure the Intel Pro 1000/PT Dual Port
Ethernet card.
This example is for an Agilent 1200 DAD system.
Configure the Card
1.
On the Windows desktop, click Start > Control Panel > Network
and Internet.
The Network and Internet options are shown.
2.
Click the View network status and tasks link under the Network
and Sharing Center section in the right panel.
3.
Click Network Connections.
The Network Connections dialog opens.
4.
Right-click Local Area Connection 2 or 3.
5.
Select Properties.
The Local Area Connection 2 (or 3) Properties dialog opens.
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Intel Dual Port Card Configuration
Figure D-1 Local Area Connection Properties Dialog
6.
Click Internet Protocol.
7.
Click Properties.
The Internet Protocol dialog opens.
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Intel Dual Port Card Configuration
Figure D-2 Internet Protocol (TCP/IP) Properties Dialog
8.
Select Use the following IP address.
9.
In the IP address field, type the default IP address.
10.
Press Tab.
11.
Click OK.
12.
Close the Local Area Connection 2 (or 3) Properties dialog.
Confirm the DAD Settings
1.
Make sure that the DAD unit is connected to the Ethernet Port A (if using
Local Area Connection 2) or Port B (if using Local Area Connection 3).
2.
On the back of the DAD unit, check the Initializing Mode switches. The
switches should be set as follows:
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Intel Dual Port Card Configuration
Initializing mode switches
Setting
SW 6
OFF
SW 7
ON
SW 8
ON
Refer to the Agilent 1200 Series Diode Array and Multiple Wavelength
Detector SL User Manual.
3.
Make sure that the DAD is using the default LAN settings (IP address
192.168.254.11).
4.
To confirm the connection between the workstation and the DAD, click
Start > Run
The Run dialog opens.
5.
6.
In the Open dialog, type ping 192.168.254.11-t, and then click OK.
•
If you receive the message: “Request Timed Out” the
communication has failed. Confirm the connections, IP settings,
and cables, and then repeat steps 1 to 5.
•
If you receive the message: “Reply from 192.168.254.11” the
communication is successful. Continue to step 6.
Using the Analyst TF software, add the DAD to a hardware profile. Refer
to the operator guide that comes with the mass spectrometer.
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Software Documentation
E
The Table E-1 table provides a list and the location of the available documents
that are installed with the software. Start Menu: All Programs > SCIEX
> Analyst TF Software > Software Guides
Table E-1 Software Guides and Tutorials
Document
Description
Advanced User Guide
Describes the features and functionality
®
of the Analyst TF software.
Analyst TF Help
Provides procedures for setting up and
using the Analyst TF software to create
methods, acquire samples, and analyze
data.
IDA Tutorial
Provides procedures for using the
Acquisition Method Editor to
create an IDA experiment.
Laboratory Director’s Guide
Describes the security functionality of
the Analyst TF software.
Mass Calibration Tutorial
Provides procedures for calibrating the
instrument.
Manual Optimization Tutorial
Provides procedures for manually
optimizing the instrument for a
particular analyte.
Peripheral Devices Setup Guide
Provides procedures for connecting
peripheral devices to the computer and
instrument.
Release Notes
Provides information about new
software features and notes on use,
known issues, and limitations.
Scripts User Guide
Provides procedures for installing and
using the Analyst TF software scripts.
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Software Documentation
Table E-1 Software Guides and Tutorials (continued)
Document
Description
Software Installation Guide
Provides information, requirements, and
procedures for installing the software.
Template Methods in Analyst TF
Software
Provides information about template
methods and parameters.
The hardware guides, System User Guides, and SelexION Technology User
Guide are available on the TripleTOF Systems Hardware Documentation
DVD. Ion source guides are now delivered with the ion sources.
The site planning guides are available on the SCIEX Web site,
http://sciex.com/products. Navigate to the product, and then click the Resources
tab.
Table E-2 lists these guides.
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Software Documentation
Table E-2 Hardware Guides
Document
®
TripleTOF 6600 System User Guide
Description
Covers the following information for
the TripleTOF 6600 system: safety and
system information, hardware profiles,
projects, instrument tuning and
calibrating, basic acquisition methods,
batches, analyzing and processing
TM
data, information about DuoSpray
ion source, generic parameters,
calibration ions and solutions, and
cleaning and maintaining the TripleTOF
6600 system.
®
TripleTOF 5600/5600+ System User Covers the following information for
Guide
the TripleTOF 5600/5600+ system:
safety and system information,
hardware profiles, projects, instrument
tuning and calibrating, basic
acquisition methods, batches,
analyzing and processing data,
TM
information about DuoSpray ion
source, generic parameters, calibration
ions and solutions, and cleaning and
maintaining the TripleTOF 5600/5600+
system.
®
TripleTOF 4600 System User Guide
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Covers the following information for
the TripleTOF 4600 system: safety and
system information, hardware profiles,
projects, instrument tuning and
calibrating, basic acquisition methods,
batches, analyzing and processing
data, information about DuoSpray ion
source, generic parameters, calibration
ions and solutions, and cleaning and
maintaining the TripleTOF 4600
system.
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Software Documentation
Table E-2 Hardware Guides (continued)
Document
Description
Site Planning Guides for TripleTOF
4600, TripleTOF 5600/5600+, and
TripleTOF 6600 systems
Provides information about how to
prepare the site as well as materials
required for installing the mass
spectrometers.
Qualified Maintenance Person Guide
for TripleTOF 4600, TripleTOF
5600/5600+, and TripleTOF 6600
systems
Provides procedures for cleaning and
maintaining the mass spectrometers.
Calibrant Delivery System Operator
Guide
Provides procedures for installing and
using the calibrant delivery system
(CDS).
Ion Source Tests, Specifications, and
Data Log
Provides parameters and specifications
for the ion sources.
Ion Source Operator Guide
Provides procedures for installation
and testing the ion source.
Ion Source Operator’s Guide
Provides procedures for installation
and testing the ion source.
III Head and Emitter Tip Assembly
Quick Start Guide
Provides information for NanoSpray III
Head and Emitter Tip assembly.
Ion Source Operator Guide
Provides procedures for installation
and testing the ion source.
TM
IonDrive Turbo V Ion Source
Operator Guide
TM
SelexION
Technology User Guide
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Note: Only trained operators
should perform any cleaning or
maintenance procedure.
Provides procedures for installation
and testing the ion source.
Provides procedures for installation
and use of the SelexION technology.
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Revision History
Revision
Description
Date
A
First release of
document.
August 2014
B
Changed Analyst® TF
version to 1.7.1.
May 2015
Changed release date.
Updated the guide for
Analyst TF 1.7.1.
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