Run STRUCTURE on the server (GUI version)

Run STRUCTURE on the server (GUI version)
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Date:
Author:
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Run STRUCTURE on the server (GUI version)
1.0
6/18/2008
Michael Matschiner (michaelmatschiner@mac.com)
1
SalzburgerLab
Protocols
Howto:
Run STRUCTURE on the server (GUI version)
Using Appleʼs build-in X-server, it is possible to have the graphical user interface (GUI) of STRUCTURE on
your display, while the computation conveniently takes place on evo-lutra.
This said, the GUI version of STRUCTURE is limited by its poor graphical output and you might want to use
the command line version and bar_plotter.rb instead to obtain publishable vector graphic STRUCTURE
results. Consult
http://www.evolution.unibas.ch/salzburger/protocols/run_structure_on_server_cl.pdf
and
http://www.evolution.unibas.ch/salzburger/software/bar_plotter_manual.pdf
for more information.
If you prefer the GUI version, hereʼs the Howto:
1. Copy your input file to evo-lutra.
This is explained in detail in the Howto: Run software on the server (general). See there.
2. Start the X-server
Go to Application> Utilities. Find the software X11. Start it. Thatʼs it.
3. Log in to evo-lutra and start STRUCTURE
In the X11 window, type:
ssh username@evo-lutra.zoo.unibas.ch -X structure
where username is the name that Lukas has sent you. Type your password and there you go.
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