User Manual

S M O S D a t a V i i e w e r

S D V

S o f f t t w a r e U s s e r r

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Prepared by

Reviewed by

Approved by

Name

Nuno Almeida

Bruno Fernandes

Function

Project Manager

Project Engineer

Nuno Almeida Project Manager

Signatures and approvals on original

Signature

DEIMOS Engenharia S.A.

Av. D. João II, Lote 1.17.01, Edifício Torre Zen, 10º

1998-023 Lisboa, PORTUGAL

Tel.: +351 21 893 3010 / Fax: +351 21 896 9099

E-mail: [email protected]

© DEIMOS Engenharia S.A.

DME-DQS-QRE0609-SUM-10-E


S o f f t t w a r e U s s e r r

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D o c u m e n t t I

I n f f o r m a t t i i o n

Contract Data

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Internal Distribution

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DME-COV-POL05

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Restricted

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Confidential

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External Distribution

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D o c u m e n t t S t t a t t u s L o g

Issue Date Change description

Draft 1 15/06/2006 First draft of the document

Draft 2 14/09/2006 Second draft of the document for FAT-V1

1.4 27/11/2006 Revision 4 of Issue 1:

Revision related to SMOS Data Viewer 1.2.

Some minor corrections (presentation, spelling and grammar)

Section 6 and 7: L1A and L1B features only apply to L1A and

L1B data

New paragraph in Appendix A (How to edit BinX files)

New Appendix B (Prerequisite on the system set-up for printing from SMOSView GUI)

New Appendix C (Phase calculations in SMOS Data Viewer plots)

New Appendix D about the transformations performed to switch from L1B Fourier components of BT to L1B reconstructed BT

1.5

2.0

12/03/2007 Revision 5 of Issue 1:

User Manual has been largely revised in each section. The current revision is related to SMOS Data Viewer version beta

1.3, including specific L1C and L2 visualization features. It also takes into account comments from ESA (from February

2007).

26/04/2007 Issue 2.0:

User Manual update for the official SMOS Data Viewer version 1.3.0.

Add L2 flag projection section

Change explanation for incidence angle selection

Add comment concerning the opening of files (.HDR or .DBL)

Add search function explanation

Add UDP – SM – OS acronyms





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2.1

2.3

2.4

2.5

2.6

2.7

2.8

14/06/2007 Revision 1 of Issue 2 :

Modifications to take into account comments from FAT-V2 meeting.

20/11/2007 Add Polarization filter for specific visualization plug-in

12/12/2008 Update the document in section 5 in order to clarify the SPR

SDV-PR-0041.

The installation process was further detailed in section 3.2

Updated the L2 Specific Visualization product table

06/03/2009 Update the document to reflect the new L1C plot functionality in section 8.1.

Clarify the IDL export limitations in section 3.5.

Updated the auxiliary files that are possible to visualize

Added an appendix with the new “Browse” structure of the

Level 0 products. This includes the correlations table.

Removed “Array Movie Viewer” section

Added new section explaining how to replace the product format plugin (section 3.3)

05/06/2009 Update the document to reflect updates on the color scale and visualization of AUX_SSS and AUX_DISTAN files.

Limitations of the Chart Plugin

Introduce the new functionality of DUMMY data display for

L2 product files

18/09/2009 Update the document to reflect new implementations on the

SMOS Data Viewer release 1.5.4.

New specific visualization available fo AUX_FARA products

Color scale can be adjusted for L1A and L1B specific visualization panels.

The L1B Reconstruction is now performed using the Blackman

Apodisation window.

14/12/2009 Update the document to reflect corrections and enchancements available on SMOS Data Viewer release 1.5.4.



Clarificarification of the specific visualization of

CRSx1A

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Added section explaining the transformation from square to star domain.

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Introduced the support of browsing intermediate products (CORN1A and UNCN1A)





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2.9

2.10

2.11

14/05/2010 Update the document to include information about the new specific visualization available for AUX_GAL products in the

SDV release 1.6.0.

Added information about the new information available in L1A and L1B specific visualization panel.

17/10/2013 Update the document to include information about the new specific visualization available for AUX_OTT products in the

SDV release 1.6.5.

26/02/2015 Update the document to include information about the new specific visualizations available for AUX_DTBCUR and

AUX_DTBXY products as part of the SDV release 1.7.0.

New section (3.1) with the Know Issues of the application

Corrected typos along the document.





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T a b l l e o f f C o n t t e n t t s

1. INTRODUCTION _______________________________________________________________ 16

1.1. Purpose and Scope _______________________________________________________________ 16

1.2. The SMOSView mission __________________________________________________________ 16

1.3. Structure of the Document ________________________________________________________ 16

1.4. Abbreviations and Acronyms ______________________________________________________ 17

2. The SMOSView application _______________________________________________________ 19

2.1. Limitations of SMOSView ________________________________________________________ 19

2.2. SMOSView data format __________________________________________________________ 19

2.3. User feedback and bug report _____________________________________________________ 19

3. Getting started with SMOSView ___________________________________________________ 21

3.1. Known Issues ___________________________________________________________________ 21

3.2. Your system setup _______________________________________________________________ 21

3.3. How do I install SMOSView? ______________________________________________________ 21

3.4. Update of New Product Schemas ___________________________________________________ 22

3.5. How do I start SMOSView? _______________________________________________________ 22

3.6. The SMOSView User Interface ____________________________________________________ 23

3.7. SMOSView buffers ______________________________________________________________ 25

3.8. The first steps ___________________________________________________________________ 26

3.9. SMOSView menu tour ____________________________________________________________ 26

3.10. SMOSView toolbar _____________________________________________________________ 30

3.11. SMOS View Known Problems and Limitations ______________________________________ 30

4. Viewing DATA content ___________________________________________________________ 31

4.1. File Chooser buffer ______________________________________________________________ 31

4.2. Format Manager Buffer __________________________________________________________ 32

4.3. Browser buffer __________________________________________________________________ 34

4.3.1. Search function _______________________________________________________________ 36

4.3.2. Data browsing in Normal mode __________________________________________________ 36

4.3.3. Interpreted data _______________________________________________________________ 37

4.3.4. Ignored data __________________________________________________________________ 38

4.3.5. Other data visualization modes ___________________________________________________ 38

4.4. Export a product subset to an ASCII file ____________________________________________ 43

4.4.1. Export data using the Browser buffer ______________________________________________ 43





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4.4.2. Export data using the New Subset selection _________________________________________ 44

5. Plotting Data ___________________________________________________________________ 48

5.1. 2D plots ________________________________________________________________________ 48

5.1.1. Plotting a data field against an auto-generated index __________________________________ 49

5.1.2. Plotting two data fields against each other __________________________________________ 52

5.1.3. Importing external data _________________________________________________________ 54

5.1.4. Multi plot visualization _________________________________________________________ 55

5.1.5. Deleting a plot or data selection __________________________________________________ 56

5.1.6. Saving a plot Template _________________________________________________________ 56

5.2. Plot settings _____________________________________________________________________ 56

6. L1A Specific visualization features _________________________________________________ 60

6.1. L1A visibility matrix _____________________________________________________________ 60

6.2. What the plot shows ______________________________________________________________ 61

6.2.1. Features available _____________________________________________________________ 62

6.2.1.1. Zoom in / Zoom out: ________________________________________________________ 62

6.2.1.2. Hide parameters to magnify visualized data: _____________________________________ 62

6.2.1.3. Plot Type _________________________________________________________________ 62

6.2.1.4. Snapshot and title settings ___________________________________________________ 63

6.2.1.5. Value details ______________________________________________________________ 64

6.2.1.6. Export ___________________________________________________________________ 64

6.2.1.7. Color Table _______________________________________________________________ 65

6.2.1.8. Stepping through the product _________________________________________________ 68

6.3. L1A Star Domain ________________________________________________________________ 69

7. L1B Specific visualization features _________________________________________________ 70

7.1. L1B Fourier Components of Brightness Temperature__________________________________ 70

7.2. L1B Reconstructed Brightness Temperature _________________________________________ 72

8. L1C Specific visualization features _________________________________________________ 74

8.1. L1C Dual polarization visualization _________________________________________________ 74

8.1.1. Plot type ____________________________________________________________________ 75

8.1.2. Pixel Attributes Projection ______________________________________________________ 76

8.1.2.1. Attributes ________________________________________________________________ 76

8.1.2.2. Geo Tools ________________________________________________________________ 77

8.1.2.3. Projections _______________________________________________________________ 78

8.1.2.4. Color Tables and Range _____________________________________________________ 78

8.1.2.5. Export ___________________________________________________________________ 79





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8.1.2.6. Zoom in / out / around ______________________________________________________ 80

8.1.2.7. Snapshot ID selector ________________________________________________________ 80

8.1.2.8. Polarization _______________________________________________________________ 81

8.1.2.9. Incidence angle selector _____________________________________________________ 81

8.1.3. Measurement Counter Projection _________________________________________________ 81

8.2. L1C Full polarization visualization _________________________________________________ 82

8.2.1. Polarization __________________________________________________________________ 83

8.2.1.1. Brightness Temperatures Specific Plot __________________________________________ 83

8.3. L1C browse products visualization _________________________________________________ 84

9. L2 Specific visualization features ___________________________________________________ 86

9.1. Controls from left pane ___________________________________________________________ 87

9.1.1. Field selection ________________________________________________________________ 89

9.1.2. Flags selection ________________________________________________________________ 89

9.1.3. Geo Tools ___________________________________________________________________ 91

9.1.4. Projections ___________________________________________________________________ 91

9.1.5. Field color Scale ______________________________________________________________ 91

9.1.6. Example _____________________________________________________________________ 92

9.2. Error mode _____________________________________________________________________ 93

9.2.1. Error color scale ______________________________________________________________ 93

9.2.2. Error mode example ___________________________________________________________ 93

9.2.3. Visualization Approach on AUX_SSS and AUX_DISTAN _____________________________ 94

9.2.4. Figure 105 AUX_SSS Zone PanelDummy Data Filtering ______________________________ 95

9.2.5. Visualization of AUX_FARA Products ____________________________________________ 95

9.2.6. Visualization of AUX_GAL_OS and AUX_GAL_SM ________________________________ 96

9.2.7. Visualization of AUX_OTTxD/F _________________________________________________ 98

9.2.8. Visualization of AUX_DTBCUR _________________________________________________ 99

9.2.9. Visualization of AUX_DTBXY _________________________________________________ 100

9.2.9.1. Plot Panel _______________________________________________________________ 100

9.2.9.2. World Map Panel _________________________________________________________ 100

9.2.9.3. Charts Panel _____________________________________________________________ 101

Appendix A Prerequisite for Printing _____________________________________________ 102

Appendix B Phase Calculations in SMOS Data Viewer plots__________________________ 103

Appendix C transformations performed to switch from L1B Fourier components of BT to L1B reconstructed BT _________________________________________________________________ 105

Appendix D: Star Domain Visualization ______________________________________________ 107





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Appendix E: Browse Structure of Level 0 Product Arrays _______________________________ 109





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L i i s t t o f f T a b l l e

Table 1: List of Terms Used in this Document................................................................................................ 17

Table 2: List of acronyms used in this document ............................................................................................ 18

Table 3 L1A products to which L1A Specific Visualization Features apply .................................................. 60

Table 4 L1B products to which L1B Specific Visualization Features apply ................................................... 70

Table 5 L1C products to which L1C Specific Visualization Features apply ................................................... 74

Table 6 L2 products to which L2 Specific Visualization Features apply ........................................................ 86

Table 7 L2 products to which L2 Specific Visualization Features apply ........................................................ 86

Table 8 L2 Ocean Salinity fields that can be projected on the geographical map ........................................... 88

Table 9 L2 Soil Moisture fields that can be projected on the geographical map ............................................ 88





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L i i s t t o f f P i i c t t u r e s s

Figure 1 SMOSView start window (From top to bottom: Menu bar, Tool Bar, Buffer) ................................ 23

Figure 2: Buffer selection box ......................................................................................................................... 24

Figure 3: How to split window ........................................................................................................................ 24

Figure 4: Multiple (x 4) windows opening ...................................................................................................... 25

Figure 5: File menu ......................................................................................................................................... 26

Figure 6 View Menu ........................................................................................................................................ 27

Figure 7 System Menu ..................................................................................................................................... 27

Figure 8: Window Menu ................................................................................................................................. 27

Figure 9: Help Menu ....................................................................................................................................... 28

Figure 10: Right-clicking example .................................................................................................................. 29

Figure 11: SMOSView Icons .......................................................................................................................... 30

Figure 12: New file chooser icon .................................................................................................................... 31

Figure 13: File Chooser buffer ........................................................................................................................ 31

Figure 14: File chooser icons .......................................................................................................................... 32

Figure 15: Folder icon ..................................................................................................................................... 32

Figure 16: Compatible file icon ....................................................................................................................... 32

Figure 17: Format manager icon ..................................................................................................................... 33

Figure 18: Format manager buffer................................................................................................................... 33

Figure 19: HTML format description example ............................................................................................... 34

Figure 20: HTML format description navigation icones ................................................................................. 34

Figure 21: New Browser icon .......................................................................................................................... 34

Figure 22: Browser buffer example ................................................................................................................. 35

Figure 23: Data browsing icons ....................................................................................................................... 36

Figure 24: Interpreted data representation ....................................................................................................... 38

Figure 25: Ignored data flag ............................................................................................................................ 38

Figure 26 Flat Mode ........................................................................................................................................ 39

Figure 27 Hex Mode ........................................................................................................................................ 40

Figure 28: Semantic mode display .................................................................................................................. 41

Figure 29 Tabular Mode .................................................................................................................................. 42

Figure 30 Transposed table from the tabular mode ......................................................................................... 42

Figure 31: "Export to ASCII" dialog box ........................................................................................................ 43

Figure 32: ASCII export example ................................................................................................................... 44





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Figure 33: Subset selection Window. .............................................................................................................. 45

Figure 34: Subset selection icons. ................................................................................................................... 45

Figure 35 New subset dialog box .................................................................................................................... 45

Figure 36: Selected data for export example ................................................................................................... 46

Figure 37: Selection of data with scroll bars ................................................................................................... 46

Figure 38: Plot default window ....................................................................................................................... 48

Figure 39: Plotter buffer icons ......................................................................................................................... 48

Figure 40 Plot Templates box .......................................................................................................................... 49

Figure 41 Data Panel ....................................................................................................................................... 49

Figure 42 Product Tree .................................................................................................................................... 50

Figure 43 Plot screen - Chart Panel ................................................................................................................. 50

Figure 44: Array Panel .................................................................................................................................... 52

Figure 45: Data value against data container index ......................................................................................... 52

Figure 46: XY series Plot template .................................................................................................................. 53

Figure 47: XY series example ......................................................................................................................... 53

Figure 48: XY series with external data .......................................................................................................... 54

Figure 49: Import file menu............................................................................................................................. 54

Figure 50: Import file example ........................................................................................................................ 54

Figure 51: Multi Plot example ........................................................................................................................ 55

Figure 52: All plots icon .................................................................................................................................. 56

Figure 53: Remove Node icon ......................................................................................................................... 56

Figure 54: Save Template Icon ........................................................................................................................ 56

Figure 55: Title renaming example ................................................................................................................. 56

Figure 56: color setting menu .......................................................................................................................... 57

Figure 57: Plotter properties color setting ....................................................................................................... 57

Figure 58: Plotter HSB color setting ............................................................................................................... 58

Figure 59: Plotter RGB color setting ............................................................................................................... 58

Figure 60: L1A visibility matrix example ....................................................................................................... 61

Figure 61: Plot Type drop down menu ............................................................................................................ 62

Figure 62: Snapshot setting details .................................................................................................................. 63

Figure 63: Data field drop down menu example ............................................................................................. 63

Figure 64: Value Details display ..................................................................................................................... 64

Figure 65: Export Box ..................................................................................................................................... 64

Figure 66 Export formats ................................................................................................................................. 65

Figure 67 JPG export result ............................................................................................................................. 65





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Figure 68: Color Tables menu ......................................................................................................................... 66

Figure 69: Color table example ....................................................................................................................... 66

Figure 70: L1A matrix representation using a color table ............................................................................... 66

Figure 71 “Display color scale in plot” selected ............................................................................................. 67

Figure 72 Min and max color scale range selection ........................................................................................ 68

Figure 73: Snapshot slider ............................................................................................................................... 68

Figure 74: Start Domain visualization example .............................................................................................. 69

Figure 75: L1B Fourier Components of BT example ...................................................................................... 71

Figure 76 L1B Plot type menu ........................................................................................................................ 71

Figure 77: L1B Spatial Representation example ............................................................................................. 72

Figure 78 L1C Specific Visualization Feature Window .................................................................................. 75

Figure 79 L1C Plot Type Menu ....................................................................................................................... 75

Figure 80 L1C Attributes Drop Down Menu .................................................................................................. 76

Figure 81 Example of L1C BT value field displayed. All pixels displayed refer to the same snapshot

(100619). ......................................................................................................................................................... 77

Figure 82 L1C Geo Tools Box Details ............................................................................................................ 77

Figure 83 Projections Drop Down Menu ........................................................................................................ 78

Figure 84 North Orthographic projection example ......................................................................................... 78

Figure 85 Color Tables Menu .......................................................................................................................... 79

Figure 86 Export Box ...................................................................................................................................... 79

Figure 87 Export formats drop down menu ..................................................................................................... 80

Figure 88 L1C Zoom in / out / around Tool .................................................................................................... 80

Figure 89 L1C Snapshot ID selector box ........................................................................................................ 81

Figure 90 L1C Incidence Angle Selector ........................................................................................................ 81

Figure 91 Measurement Counter Projection L1C example ............................................................................. 82

Figure 92: BT vs Incidence Angle Selection Menu......................................................................................... 83

Figure 93: BT vs Incidence Angle Chart ......................................................................................................... 84

Figure 94 L1C browse product visualization example (North orthographic projection) ................................. 85

Figure 95 L2 specific visualization feature window........................................................................................ 87

Figure 96 Field selection box (OS product on the left; SM product on the right) ........................................... 89

Figure 97 Flags selection box .......................................................................................................................... 89

Figure 98 Flags color transparency menu ........................................................................................................ 90

Figure 99 Flags transparency selection menu .................................................................................................. 91

Figure 100 L2 field color scale ........................................................................................................................ 92

Figure 101 L2 OS product visualization example ........................................................................................... 92





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Figure 102 Click on the “Error Mode” icon to start the error mode ................................................................ 93

Figure 103 Error color scale ............................................................................................................................ 93

Figure 104 Error mode display above SSS field ............................................................................................. 94

9.2.4. Figure 105 AUX_SSS Zone PanelDummy Data Filtering .................................................................... 95

Figure 106 Display DUMMY Values Option ................................................................................................. 95

Figure 107: AUX_FARA Specific Visualization ............................................................................................ 96

Figure 108: AUX_GAL_OS Specific Visualization ....................................................................................... 97

Figure 109: AUX_GAL_SM Specific Visualization ....................................................................................... 97

Figure 110: AUX_OTT Dual Pol Specific Visualization ................................................................................ 98

Figure 111: AUX_DTBCUR Specific Visualization .................................................................................... 100

Figure 112: AUX_DTBXY World Map ........................................................................................................ 101

Figure 113: AUX_DTBXY Charts Panel ...................................................................................................... 101

Figure 114: Star Domain Representation ...................................................................................................... 107



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P u r p o s s e a n d S c o p e

This document provides a detailed guide to using the SMOSView tool for viewing data from the Earth observation data products contained in binary files. It explains how this data can be extracted, decoded and displayed using various visual representations, including images where appropriate, and exported in a variety of formats.

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T h e S M O S V i i e w m i i s s i i o n

SMOS is an Earth Explorer mission dedicated to analyzing the soil moisture and ocean salinity. These parameters are two key variables used within models developed to study the meteorology and hydrology of the Earth. The European Space Agency launched a program aimed at deriving these parameters from

Earth satellite observation data, resulting in the SMOS mission.

The SMOS satellite will carry a specific payload named MIRAS (Microwave Imaging Radiometer with

Aperture Synthesis), a two dimensional L-band interferometer radiometer. This instrument will measure the brightness temperature field from which soil moisture and ocean salinity are derived.

INDRA is responsible for implementing the Data Processing Ground Segment (DPGS). This processing facility will ingest raw data down-linked from the SMOS satellite and produce data containing the ocean salinity and soil moisture parameters.

Developing a data processing ground segment is a complex task and requires a data visualization tool.

This tool is used to visualize the content of binary data files generated by the ground segment and verify their content. The SMOS Data Viewer is called SMOSView in the following part of this document.

SMOSView is a tool capable of opening and decoding SMOS data. It then displays the contents as tables, graphs as appropriate.

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After this introduction, the document is divided into a number of major sections, which are briefly described below:

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Chapter 2 presents the SMOSView application and its functionalities.

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Chapter 3 details the first steps to use SMOSView; installing the software, system set-up and the

User Interface.

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Chapter 4 explains how to view product content and format description

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Chapter 5 describes plotting capabilities of SMOSView

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Chapter 6 details visualization features of L1A data

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Chapter 7 details visualization specific features of L1B data

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Chapter 8 details visualization features of L1C data

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Chapter 9 details visualization features of L2 data

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Appendix A is about the BinX to Xin converter

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Appendix B gives the Prerequisite on the system set-up for printing from SMOSView GUI





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

Appendix C details Phase calculations in SMOS Data Viewer plots

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Appendix D may be useful to scientific users who want to understand how SMOSView performed the transformations to switch from L1B Fourier components of BT to L1B reconstructed BT

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A b b r e v i i a t t i i o n s a n d A c r o n y m s

The following terms have been used in this report with the meanings shown.

Data Set

Data Set Record

A collection of data set records in an SMOS product.

Dialog

A collection of data fields of certain sizes and data types.

A window that displays information or presents options to the user.

Focus

Java Runtime

Environment

Product

View

The destination of keyboard input.

The software required to run a Java application

An SMOS data file

A manner of visualizing data. E.g. a Graph View or an Image

View.

Table 1: List of Terms Used in this Document

The following acronyms have been used in this document:

ASCII American Standard Code for Information Interchange

ADS

BT

COTS

Annotation Data Set (time stamped processing data)

Brightness Temperature

Commercial Off The Shelf Software

DSD

ESA

GIF

GUI

HDF

HMI

HTML

ID

IDL

Data Set Descriptor

European Space Agency

Graphics Interchange Format

Graphical User Interface

Hierarchical Data Format

Human Machine Interface

Hyper-Text Mark-up Language (web page format)

IDentifier (of snapshot)

Interactive Data Language



PPM

RGB

SDV

SM

SMOS

SPH

TIFF

UDP

VM

IEEE

JPEG

JVM data block

MPH

OS

PDS

S o

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f f t

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t w

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Institute of Electronic and Electrical Engineers

Joint Photographic Expert Group (image format)

Java Virtual Machine (also Java VM)

Measurement Data Record

Main Product Header

Ocean Salinity

SMOS Payload Data Segment (systems processing and archiving data)

An image format common on Unix

Red Green Blue

SMOS Data Viewer also named as “SMOSView”

Soil Moisture

Soil Moisture and Ocean Salinity

Specific Product Header

Tagged Image File Format

User Data Product

(Java) Virtual Machine (used to run java software. Also JVM)

Table 2: List of acronyms used in this document





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The SMOSView software enables a user to decode and display data from SMOS products, display the contents as images or graphs and export the data to a number of alternative formats.

SMOSView is a tool providing a quick and easy look at SMOS data products. Ease of use is emphasized through its simple graphical user interface for data exploration and visualization. This version is intended in particular for the following purposes:

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Browse through data files and display their content (see section 4),

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Provide plotting capabilities (see section 5)

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M O S V i i e w

SMOSView is not intended for a detailed analysis, visualization and processing of Earth observation data. There are other commercial and proprietary tools providing these facilities and with many specialized options. However, SMOSView allows selected data to be exported to IDL to support more complex analysis.

Widely used commercial packages include:

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IDL & ENVI http://www.ittvis.com/

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Matlab http://www.mathworks.com

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Mathematica http://www.wolfram.com/

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Noesys http://www.ittvis.com/

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PV-WAVE http://www.vni.com

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S M O S V i i e w d a t t a f f o r m a t t

SMOSView is able to handle multiple versions of any Earth observation data products, as long as the product formats are described in the SMOSView format database.

SMOSView handles all these products thanks to the XIN language, an XML meta-data language used to describe the content and structure of any binary data file. The use of XIN language within SMOSView is fully described in the SMOSView Software Specification document.

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U s e r f f e e d b a c k a n d b u g r e p o r t t

User feedback is essential for improving SMOSView and comments and bug reports can be sent directly to the ESA Earth Observation Missions Helpdesk: mailto:[email protected]?subject=SMOSView%20Bug%20Report

When making a bug report, please include the following information:

From the “About” SMOSView option in the Help menu:



Operating System & Machine Type



Java version, vendor name and vendor specific



SMOSView and data format version numbers





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

Steps leading to problem

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Any text sent to the terminal

We would like to thank all those who are kind enough to send bug reports and feedback. Every message helps to make the tool better for everyone in the future.





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This chapter presents the first steps to complete before using SMOSView, i.e. installing SMOSView on various platforms and starting the tool.

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K n o w n I

I s s u e s s

The following list presents the known issues of SMOSView that may affect the user interaction with the application:



The tool has been tested and supported for Windows XP, Vista and 7 (32 and 64 bits installations).

For Windows 8 it is only possible to install the 32 bits installation package.



The Specific Visualization feature of the OTT data from AUX_DTBXY a AUX_DTBCUR products takes around 30 seconds to load. Please wait while the buttons are disbaled on the visualization panel.



During any Specific Visualization on the World Map the points projected may disappear on some zoom levels. If that happen please center again the map with a click on the center of the navigation arrows.

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Y o u r s y s t t e m s e t t u p

SMOSView is a Java application; it can run on any platform. The main requirement for the usage of the tool is RAM memory.

The minimum amount of memory required to launch SMOSView is equal to 512 megabytes, this will allow to use the browse product feature and perform some basic plots (using the chart) of small products.

To use comfortably SMOS View and take advantage of the specific visualization feature up to Level 1C it is recommended to have at least 1 GB of memory. To use the specific visualization of L2 ADFs and

L2 products it is recommended to have 2GB dedicated to SMOS View.

SMOSView is fully supported only on Java 1.5, which is included in the installation package. For more information please refer to www.java.com

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NOTE: On 64 Bit operating systems installations, the library glibc-32 bits version is required to be installed.

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H o w d o I

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SMOSView provide installation packages for Microsoft Windows, Mac OS X, AIX, Solaris, Linux and

HP-UX operating systems.

Unzip the archive, open the file “install.htm” with your web browser and download the installation file for your architecture. The installation instructions presented below are also available in the page.

Windows XP, Vista, 7 :



After downloading, double-click “install.exe”



You do not need to install any other software. A Java virtual machine is included with this download.





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Windows 8



After downloading, right-click on “install.exe” and select "Properties"



On the "Compatibility" tab enable the Compatibility mode and select "Windows 7" and press

"Ok"



Double-click “install.exe”

Mac OS X:



After downloading, double-click “install”.



Requires Mac OS X 10.4 or later



Be sure you have Java 1.5 or later installed.



The compressed installer should be recognized by Stuffit Expander and should automatically be expanded after downloading. If it is not expanded, you can expand it manually using StuffIt

Expander 6.0 or later.

AIX / Linux / HP-UX:



After downloading open a shell and, “cd” to the directory where you downloaded the installer.



At the prompt type: “sh ./install.bin”



A Java virtual machine is included with this download. It will run automatically when you run the shell script.

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U p d a t t e o f f N e w P r r o d u c t t S c h e m a s s

SMOS View install by default a “jar” file (smos-formats-plugin-SNAPSHOT.jar) containing the latest

XIN and XIS SMOS product schemas available on the date of the release, however new schemas releases may happen and this does not mean that a new version of the software shall also be distributed.

SMOS View has the possibility to replace the product schemas jar file with a newer version and the new products can instantanely be read. The process is very simple ; the user just need s to replace the old

“smos-formats-plugin-SNAPSHOT.jar” file with the new one.

The “smos-formats-plugin-SNAPSHOT.jar” is located in the directory where SMOS View was installed.

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H o w d o I

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In order to run SMOSView:

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On Microsoft Windows: In the 'Start' menu, click on the SMOSView shortcut in the SMOSView group menu.



On an X Windows system (UNIX/Linux) or a BSD based system (Mac OS X): Open a terminal and cd in the SMOSView installation directory. Then type ./SMOSView.



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I n t t e r r f f a c e

When SMOSView starts, a large window appears containing a menu bar, a tool bar and an area just

below known as a buffer, as shown in the Figure 1.

Menu

Bar

Buffer

Figure 1 SMOSView start window (From top to bottom: Menu bar, Tool Bar, Buffer)

A window may contain many buffers, and a drop down list at the top of the buffer area is used to switch

between buffers; the buffer selection box. To open this selection box as shown in the Figure 2, the user

has to click on its label. In this example, the buffer selection box is labeled:

[FILECHOOSER] C:\SMOSView\SMOS TEST PRODUCT\L1A-L1B.

The buffer selection box could also be labeled [BROWSER] followed by the product name if a product is being browsed or [SMOSSVF] followed by the name of the product if the product is being studied with the Specific Visualization Features.

After more than one buffer has been opened, it is possible to come back to a dedicated buffer by clicking the buffer selection box located under the main window icons and selecting the buffer of interest.





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Figure 2: Buffer selection box

Multiple buffers can be displayed in the window at the same time, by splitting the window horizontally and or vertically. It can be done by choosing “Split horizontally” or “Split vertically” in the “Window”

menu of the menu bar (see Figure 3 and also Section 3.9, Window Menu Figure 8).

Figure 3: How to split window

Split window sections can be closed by “Unsplit” in the “Window” menu of the menu bar.

The same list of buffers is available in each split window section.

Multiple windows may also be opened (see Figure 4, where 4 window-areas have been opened), and

within each window, an independent list of buffers may be opened.





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Figure 4: Multiple (x 4) windows opening

A buffer is a SMOSView window containing a set of functionalities/tools associated with a product.

Once a product data file is selected with the File Chooser buffer as described in section 4.1 of this

document, the user is able to use the SMOSView functionalities associated with the selected data product by opening a Lat/Long plot, a Plotter or an Image Viewer buffer.

The use of the Format Manager buffer does not require any product to be opened before using it.

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S M O S V i i e w b u f f f f e r s

Interaction with data files and the various tools and views provided by the application is through buffers.

The current version of SMOSView provides the following buffers:



File Chooser buffer – presents a view of the file system, and identifies compatible files that can be opened with SMOSView



Export to ASCII – allows to export selected data to an ASCII file (.txt extension)



Export to IDL – allows to export selected data to IDL (2 files are created with .pro extension and .dat extension)

NOTE: There is a limitation on the export IDL feature on variable size arrays. IDL export works correctly if only one pixel is exported. When more than one pixel is exported only the first N-





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New Browser buffer – presents a view of the contents of a data file.

New Chart – allows the user to plot data



SMOS Specific Visualization features – allows the user to analyze SMOS L1A, L1B, L1C and L2 products



New Format Manager buffer – presents a description of each of the file formats supported by SMOSView.



New Subset Selection buffer – allows the user to select a data set inside the product



Help – opens the user guide in HTML format

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T h e f f i i r s t t s t t e p s

After starting SMOSView, the default window appears which contains a single File Chooser buffer.

This allows one to navigate the file system and select a file that can be opened in the application.

At this stage, all the available menus are displayed, but many of the menu items are disabled.

To start viewing data, select a compatible file in the File Chooser, and open a buffer to view the contents

(via the toolbar or the buffer menu).

It is also possible to view format descriptions for compatible files via the Format Manager.

The File Chooser buffer is described in section 4.1 and the Format Manager buffer is detailed in section

4.2.

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S M O S V i i e w m e n u t t o u r

This section describes the menus available in SMOSView in version 1.5.2.

The File menu enables the user to open a File Chooser buffer or quit the program.

Figure 5: File menu

The View Menu enables the user to open a Browser buffer or a Plotter or specific visualisation features

buffers. The buffers are only available once a product has been selected (see section 4.1). The Browser,

Plotter and specific visualisation features will only be available if a compatible data file has been





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Figure 6 View Menu

The System menu enables the user to open the Format Manager buffer, providing a description of the formats contained within SMOSView, as well as a New Logger buffer, giving detailed information on the current SMOSView session as to memory usage, Java version and error reporting.

Figure 7 System Menu

The Window menu enables the user to open a new window, close a window, or split/unsplit a window.

Figure 8: Window Menu

Splitting a window is useful for working with more than one product, or visualizing an image and the related data product file at the same time. (i.e. two or more buffers simultaneously)

For example, a Format browser buffer and an Image Viewer buffer may be viewed side by side by clicking on the Split horizontally menu item, and then selecting the Image Viewer buffer in the second split section.

The sixth menu in the menu bar is buffer specific, it means it depends on the content of the current buffer. This 6 th

menu provides access to options specific to each buffer type:



When a file chooser is opened, the 6 th

menu proposes either to go to the home folder, or to the parent folder, or to refresh the current window :



When a browser is opened, the 6 th

menu proposes various options to visualize the content of the selected product: visualization mode selection (normal mode, flat mode, Hex mode, Semantic mode,





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

When a Plotter buffer is opened, a Plotter menu appears. Depending on the selected field

(Plot/Series/Data), the selectable options are different. They could be: Add Plot, Add Series from product, Add XY series, Add data from file, Add data from product, Remove node, save template, export chart, or print chart:



When the specific visualization feature (SVF) buffer is opened, the 6 th

menu is not an SVF specific menu but the help menu:

The Help menu provides an access to the user guide (based on this document).

Figure 9: Help Menu





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After a buffer is opened, right clicking in a buffer will display additional context sensitive menu options, associated with that buffer as well as a shortcut to some the menus in the menu bar. For example after opening a Format Browser, right clicking in the buffer will display the following menu:

Figure 10: Right-clicking example





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S M O S V i i e w t t o o l l b a r

Below the menu bar, a toolbar is provided as shortcuts for common tasks:

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File chooser



Export to ASCII

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Export to IDL

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Format Browser

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Plotter

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SMOS Specific visualization features

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New Subset Selection

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HTML format description

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User guide

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Figure 11: SMOSView Icons

Toolbar icons are only highlighted when the associated functionality is ready for use. For example, after opening SMOSView, the "Export to ASCII" is greyed, as there is no file open to export data from.

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S M O S V i i e w K n o w n P r o b l l e m s a n d

L i i m i i t t a t t i i o n s

Before the user starts to use SMOS View , it shall be clear that the tool have some limitations and some known problems specially on big product files. This section contains some important information related to these issues and will be updated along with the new releases of the tool.



The chart plugin have memory limitations, when the user tries to plot a variable from a product with a high number of points (more than 2 million) it is very slow and sometimes just freeze.

This happens on products such as LAI, AUX_SSS, AUX_DISTAN, and some L2 products.



In the browser plugin some indications that the data is loading is missing. Sometimes it is still loading data and no information is shown. This usually occurs on big product files.



The specific visualization panel has refresh problems, sometimes when the user tries to visualize

L2 flags they don’t appear in the world map, however if the user zoom an area the flags appear.



When the user try to use the specific visualization L2 data ( especially AUX DGG files) the specific visualization panel is loaded and became completely grey , user must resize the window view the content correctly.





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This chapter details the use of SMOSView for viewing products.

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F i i l l e C h o o s e r b u f f f f e r

In order to select a product for analysis in SMOSView, select a File Chooser buffer (one is opened by default at startup), or click on the "New Filechooser" icon.

Figure 12: New file chooser icon

Figure 13: File Chooser buffer

It is possible to navigate through to common directories using the “Home directory”, “Parent directory”, or “Drive selection” toolbar icons.



Home directory icon:

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Parent directory icon:

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Refresh view icon:





Previously accessed directory:



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Drive selection:

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Figure 14: File chooser icons

The “Refresh view” icon enables the user to update the view of the current folder if a file has been added/deleted from/to the folder since list was first displayed. The location bar provides the location of the selected directory/file. Folders are highlighted with a blue icon.

Figure 15: Folder icon

Double click on a folder to view its contents. Use the Parent directory toolbar icon to go up to the directory level above the current list.

Once the data is located, files compatible with SMOSView are highlighted with the following icon:

Figure 16: Compatible file icon

It is then possible to select the data of interest by simply clicking once on the file of interest. Once the file is selected, it is highlighted in yellow.

To open a compatible data, the user has to double click on its name. The data will then be automatically

opened in a new Browser buffer, displaying the content of that file (see section 4.3).

After selecting a product, a user can browse through its content using the format browser.

To open a file, the user can either double click on its header name (.HDR) or on its data block name

(.DBL).

It is also possible to browse some intermediate products such as CORN1A and UNCN1A in EEF format. In this case SDV automatically generate the corresponding HDR and DBL files allowing the user to browse the content.

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F o r m a t t M a n a g e r B u f f f f e r

In order to view format descriptions of compatible data files, click on the "New FormatManager" icon.



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Figure 17: Format manager icon

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Figure 18: Format manager buffer

The FORMAT MANAGER buffer contains the list of file formats that are recognized by SMOSView and potentially multiple versions of each format.

The version gives the global version of the format, not the header or the datablock version.

The list is obtained by inspecting the formats shipped with SMOSView, therefore the list is always in line with the list of products that can actually be read using SMOSView.

Double click on any of the formats to visualize the detailed description.





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Figure 19: HTML format description example

Format information is available as a hierarchy, through which one navigates by clicking on blue links

“Details”, similar to a web page.

Once the “Details” page opened, it is also possible to navigate through the format descriptions using the

"Previous page", "Next page", or "Reload page" toolbar icons placed in the top left corner of the window.

Figure 20: HTML format description navigation icones

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B r o w s e r b u f f f f e r

Select a file in the File Chooser (section 4.1) and create a Browser buffer by either double clicking on

the product file, or clicking once on the highlighted "New Browser" icon.

Figure 21: New Browser icon





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Figure 22: Browser buffer example

The Browser buffer has a number of display modes; Normal mode, Flat mode, Hex mode, Semantic mode and Tabular mode. By default, the Browser buffer opens in Normal mode.

The buffer is divided in two panes: On the left-hand side we find a hierarchical view of the content of the file and on the right-hand side, we find the content of selected parameter or structure, and interpretation of the field values and description.

A tool bar is displayed at the top of the buffer with a number of toolbar icons to allow switching between the different modes and navigating through the selected file.



Normal mode

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Flat mode

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Hex mode

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Semantic mode

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Tabular mode





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

Parent element

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Previous element

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Next element

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Previous cousin



Next cousin



Print browser panel

Figure 23: Data browsing icons

There are two types of icons within the browser window:



Representing a data container.

A data container can contain other data containers or leaf nodes.



Representing a leaf node, containing data.

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S e a r c h f u n c t i i o n

The user can search for a field name or a value within the product with the search function at the bottom of the browser window.

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D a t a b r o w s i i n g i i n N o r m a l l m o d e

One single click on a container (blue-folder icon) in the left-hand pane will display the content of the container in the right-hand pane.

Double clicking on a container in the left-hand pane will provide the content of the container in the right-hand AND left-hand panes.

It is also possible to browse through a product with one single click on the tree opening symbols associated with a data container in the left hand pane:



tree opening symbol

Clicking on a leaf node in the left-hand pane will provide a view of the parent node in the right-hand pane; the selected leaf node will be highlighted in the right-hand pane.

It is also possible to visualize the content of a container by double clicking on it in the right-hand pane.

In this case, the container is highlighted in the left-hand pane.

It is possible to browse through the product using the “Parent element”, “Previous element” and “Next element” icon. Using the “Next” and “Previous” icons enables the user to view the next or previous element within a container. Using the “Parent” icon enables the user to view the higher-level data container.





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In the context of SMOSView, two cousins are data containers or leaf node belonging to a repeated structure within a data block. It is also possible to browse through the products clicking the Previous cousin and Next cousin Icons. When a leaf node or data container is selected within a data block, clicking on the next/previous cousin will provide same leaf node or data container view of the next/previous data block.

Example: for a SMOS L1B data product, the user selects and clicks on the Snapshot_ID in a container

“binary-data/Data_Block/Temp_Snapshot_dual/ Temp_Snapshot_dual/item 7”.

=> Clicking on the Next cousin icon, SMOSView will show the Snapshot_ID of “binarydata/Data_Block/Temp_Snapshot_dual/ Temp_Snapshot_dual/item 8”.

When a leaf node is selected, the location bar provides the path to the higher-level container. When a container is selected, the location bar provides the path of the container within the product.

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“Interpreted data” are elements of a data file whose numerical value is translated into human readable form.

For example, considering a SMOS L1B product, in the container:

“binary-data/Data_Block/Temp_Snapshot_dual/ Temp_Snapshot_dual/item 7”, the field “Flags” is interpreted. The field can have a number of integer values, but SMOSView is capable of decoding the meaning of those values. For instance the value 0 corresponds to H (horizontal polarization).

The same applies to an other field in this container: for example Snapshot_Time (day 2610 has been interpreted as 23-Feb-2007).

In the right-hand side window, interpreted data appear within a yellow box:





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Figure 24: Interpreted data representation

Interpreted data can apply to leaf nodes or containers.

For example, in the SMOS L1B data product, the Snapshot_Time container, consists of 3 fields: Day,

Seconds, and Microseconds, but can be interpreted as a human readable time.

It is also possible to read the numerical value associated with an interpreted data when a data container is interpreted. Double-click on the data container, SMOSView will display the numerical value of the interpreted fields. Clicking back on the parent data container changes the field back to the interpreted value.

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If SMOSView expects to read an integer, and read an unsigned integer the product, it is flagged in the following way:

Figure 25: Ignored data flag

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O t h e r d a t a v i i s u a l l i i z a t i i o n m o d e s

Data selected in “Normal” mode can be visualized in other modes using the icons placed on the top left hand side of the BROWSER.



"Flat mode”:





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If a container is selected, all data within the container are displayed in the right-hand pane down to the lowest leaf level in a hierarchical order. If a leaf node is selected, the parent container is displayed in flat mode in the right-hand pane.

Figure 26 Flat Mode



"Hex mode”:

In Hex mode the whole product file is displayed in hexadecimal format in the right-hand pane. The data selected in the browse tree is also highlighted in yellow in the right hand pane.





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Figure 27 Hex Mode



“Semantic mode”:

This mode shows all the semantic data contained within a field of interest. In the case of SMOSView, it should not be useful, except for L3 or L4. The semantic data is limited to images. If a product or a subset of a product contains an image, clicking on the semantic mode icon will display the available images and related channels in the right-hand pane.





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Figure 28: Semantic mode display

Using the semantic mode, it is possible to open an Image Viewer buffer by selecting one or more channels from the right-hand pane. The user can select to visualize a single channel of interest with a simple mouse click. To select multiple channels of interest hold the “Ctrl” key pressed and click on the additional channels until they are highlighted.



“Tabular mode”:

To use this mode, the user needs to select a sequence of data or an array (which could be a data container).

The tabular mode allows to visualize all the selected values (or the values contained in the array) in a

table that may be transposed (see Figure 29).

To transpose the matrix, click on the upper left cell labeled “tt”.

The elements of the transposed table (see Figure 30) can be copied/pasted in another application.





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Figure 29 Tabular Mode

Figure 30 Transposed table from the tabular mode





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The Export to ASCII can be performed in two ways:

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E x p o r t d a t a u s i i n g t h e B r o w s e r b u f f e r

In order to export a product subset to an ASCII file, it is first necessary to select the data of interest inside a Browser buffer.

When the Browser is in “Normal mode” or “Flat mode”, use the right-hand pane to select containers and/or leaf nodes of interest that you would like to export.

To select multiple items, hold the “Ctrl” or “Shift” key while selecting containers and nodes. (CTLR +

Click for selecting non-consecutive items, Shift for selecting consecutive items).

Upon pressing the "Export to ASCII" icon in the toolbar , an "Export to ASCII" dialog box appears allowing you to perform an ASCII export.

Figure 31: "Export to ASCII" dialog box

You can then choose to perform a Hierarchical export or a Tabular export.

With the Hierarchical export, the user can choose to export:



the element name



the element offset



the element value



the element unit.





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Figure 32: ASCII export example

The example in Figure 32 shows the type of output that is produced by the "Export to ASCII"

Hierarchical option. Note that the file has a ".txt" extension.

With the Tabular ASCII, the user has the possibility to select the separator type as well as inserting a column header or not. The Tabular ASCII is very useful if the user wants to export its data in Excel for example. In that case, the user should set as a separator a single comma “,” and then save the file in the csv format. The user can then open the saved file using Excel.

It is important to notice that the Tabular ASCII export function needs to be used with properly selected coherent data. If you try to export a two dimensional array structure over a repeated number of data blocks along with data contained in the product header for example, there is no guarantee that the export will be satisfactory. On the contrary, if the selected data is coherent, i.e. the selected data is of the same hierarchical level, and containing no dummy data, the Tabular export to ASCII is the perfect tool for allowing further processing with other tools.

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E x p o r t d a t a u s i i n g t h e N e w S u b s e t s e l l e c t i i o n

It is also possible to select the data to export clicking on the “New Subset” icon. Select a file in the File

Chooser (section 4.1) and click on the “New Subset” icon. The following Window appears:





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Figure 33: Subset selection Window.

On the top left hand side window area, the user can find the following Icons:

Figure 34: Subset selection icons.

The user can then click on the New Subset blue icon : he has to enter a name for the new subset to be created and click OK:

Figure 35 New subset dialog box

Then the product structure will appear in the right-hand side window. The user can then select and browse through the product structure and select the data to export simply clicking in the selection box

attached to the data to be exported (see Figure 36).





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Figure 36: Selected data for export example

The user can then save the created subset, rename it or delete it clicking on the icons presented in Figure

34: Subset selection icons. The saved subset will be available next time the user opens the product.

When a product is made of repeated data structures, you can use scroll bars at the bottom of the selection window to select the subset of data to export, as shown in the example below:

Figure 37: Selection of data with scroll bars

The selected data product contained 2791 Scene_BT_Fourier items. For the scroll bars to be available, the user needs to click on the item array container Scene_BT_Fourier [1..2791] selection box. This





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To complete the export, the user must click on the Export to ASCII Icon in the tool bar and proceed in the same way as described in the previous paragraph.

Once more, the user must select data carefully to perform a valid Export in a Tabular format.





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SMOSView allows the user to perform 2D and 3D plots using the 2D plotter buffer and the 3D plotter buffer.

In order to avoid out of memory issues caused by the chart plugin, the maximum number of points that is possible to plot is limited to the first 600.000. If the user tries to plot a variable with a higher number of points a warning message is displayed and the limited plot is produced.

NOTE: It shall be noted that in versions of SDV prior to 1.5.2 the data is loaded in memory and then displayed. Any change on the display preferences will imply a reload of the data into memory.

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In order to use the 2D plot, the user must select first a file using the File Chooser buffer as presented in section 4.1 of this document.

The user can then click on the New Chart Icon ; the following window appears:

Figure 38: Plot default window

The following icons are available on the top left hand side of the plotter window:

Figure 39: Plotter buffer icons





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From left to the right, the following Icons provide the following functions:



Add plot



Add Series from Product

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Add XY Series



Add data from File



Add data from Product



Remove Node



Save template



Export Chart



Print Chart

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P l l o t t i i n g a d a t a f i i e l l d a g a i i n s t a n a u t o g e n e r a t e d i i n d e x

In the “Plot Templates” Box (Figure 40), the user must click on the magnifier icon

then “Serie_1”, then “Data_1”.

of “Plot_1”,

Figure 40 Plot Templates box

A new panel, the “Data Panel” box becomes active (Figure 41), below the Plot Templates box.

Figure 41 Data Panel

The user must browse inside the data to select data field of interest to be plotted with the Product Tree

(See panel on the lower left, Figure 42): The user has then to click on the field of interest to plot it.





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Figure 42 Product Tree

While browsing the data deep inside the “Product Tree” another panel becomes active, which is the

“Chart Panel” (big window in the middle). It corresponds to the panel where the plot is displayed, as

seen in Figure 43.

The plotter will then try to display the selected data field. If the selected data field is contained within a repeated structure inside the data product file, the plotter will show the selected data field value against the repeated data structure index.

If the data field is contained inside two subsequent repeated data structures, the user has the option to select the index of one data structure or the other.

Figure 43 Plot screen - Chart Panel





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Let’s have a look at the following example:

Let’s assume that the field Y_TO_PLOT is contained within an array or structure called

CONTAINER_LEVEL_A of size N. Let’s assume that CONTAINER_LEVEL_A is contained within an array or structure CONTAINER_LEVEL_B of size M and so on.

CONTAINER_LEVEL_C 1

CONTAINER_LEVEL_B 1

CONTAINER_LEVEL_A 1

Y_TO_PLOT 1

Y_TO_PLOT 2

Y_TO_PLOT 3

…..

Y_TO_PLOT N

CONTAINER_LEVEL_A 2

Y_TO_PLOT 1

Y_TO_PLOT 2

Y_TO_PLOT 3

…..

Y_TO_PLOT N

…………..

In such a case, the user may want to plot:



Y_TO_PLOT data can be plotted against indices of the CONTAINER_LEVEL_A 1 array



Y_TO_PLOT 1 can be plotted against CONTAINER_LEVEL_A 1, CONTAINER_LEVEL_A 2 and so on.



Y_TO_PLOT 1 of CONTAINER_LEVEL_A 1 can be plotted against CONTAINER_LEVEL_B

1, CONTAINER_LEVEL_B 2 and so on.



Y_TO_PLOT of CONTAINER_LEVEL_A 1 in CONTAINER_LEVEL_B 1 can be plotted against CONTAINER_LEVEL_C 1, CONTAINER_LEVEL_C 2 and so on.

In all cases, the “Array” menu will offer the possibility to select different (X, Y) data sets at the following level of the data block: CONTAINER_LEVEL_A, CONTAINER_LEVEL_B or

CONTAINER_LEVEL.





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Figure 44: Array Panel

The user can also select the index range using the sliders under the array index selection box to modify the selected data. To change the slider position, set the mouse cursor over the slider icon, click left with the mouse and maintain the button clicked, drag then left or right the mouse.

Figure 45: Data value against data container index

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P l l o t t i i n g t w o d a t a f i i e l l d s a g a i i n s t e a c h o t h e r

The user can create an XY plot with data contained inside the product data file:

First, repeat the previous steps to select data to be set on the X axis.

To select data to be set on the Y axis, click on the Serie_1 Icon

, click then on the “add data from product” icon

. A Data_2 icon appears in the Plot Templates box, and the Plot_1 icon

changes as well to the “add XY series”. See Figure 46.





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X

Y

Figure 46: XY series Plot template

The user must then browse through the product tree to set data on the Y axis just as he did for the X axis, opening and browsing through the product tree.

Note that X-axis data always corresponds to the first (upper) icon in the Series list and the Y-axis always corresponds to the lower one.

Figure 47: XY series example





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I I m p o r t i i n g e x t e r n a l l d a t a

With the SMOSView data plotter, it is possible to import numerical data stored in a file on a computer.

If the user clicks on the Plot_1 icon appears:

, and then clicks on the add XY series , the following

Figure 48: XY series with external data

The Data_3 icon corresponds to X-axis data that must be imported from an external data file.

In this example, let’s click on the Data_3 icon: The following menu appears:

Figure 49: Import file menu

The user can then Click on the “Browse” tab and select a file containing numerical values. Data to be imported must be contained in an ASCII file with one single value per line.

As an example, let’s import the following file:

Figure 50: Import file example

The user can then complete the plot by clicking on the Serie_2 icon and then on the “Add

Data From Product Icon”

to select data to be set on the Y-axis as described in the previous section.





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Data can also be imported on the Y-axis. When the plotter is in the configuration described in section

5.1.2, instead of clicking on the “Add Series From Product” icon, the user can click on the “Add Data

From File”

icon and follow the same steps described here above to import the data file.

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M u l l t i i p l l o t v i i s u a l l i i z a t i i o n

The user can visualize several plots in the same chart within the Plot_1.

He must select the first series with the product tree following the steps detailed previously.

He will add another series in the chart by clicking on Plot_1 icon , and then clicking on the

“Add Series From Product” icon

. The user can follow the steps for data selection with the product tree as described in the section here above.

The user can see the resulting plots on the same graph by clicking on the Plot_1 icon .

Figure 51: Multi Plot example

For the multi-plot to be available and easy to read, the user shall take care about the data selected on the

X-axis and make sure that the ranges and X-axis units are coherent. For example, if the user creates a first curve whose X-axis values range from 1 to 10 (Index), and a second plot whose values range from

–100000 to +49000 (mm), there will be a visualization issue on the multi-plot display.





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As a rule, the multi-plot will use the unit (or index) of the first plot created within the Plot_N template and only show those curves whose unit (or index) is the same as the first plot.

Data on the Y-axis can be of any unit, the corresponding scale will be shown on the right hand side of the multi-plot.

The user can create any number of multi-plots by clicking on the “All plots” icon and then clicking on the “Add Plot” icon.

Figure 52: All plots icon

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D e l l e t i i n g a p l l o t o r d a t a s e l l e c t i i o n

The user can easily remove individual plots, by clicking on the plot icon (typically, Serie_N icon) and then clicking on the “Remove Node” icon.

Figure 53: Remove Node icon

He can also remove entirely a plot (typically, Plot_N icon), and click on the “Remove Node” icon.

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S a v i i n g a p l l o t T e m p l l a t e

The user may want to be able to plot the same data fields using different product files of the same type.

SMOSView allows the user to save a plot template and reuse it with other data products of the same type.

To save a plot template, click on the “All plots” or “Plot_N” icon and then on the “Save Template” icon.

Figure 54: Save Template Icon

The next time the user opens the data plotter buffer, the plot templates will be automatically loaded in the “Plot Templates” box and the related plots available for visualization.

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Plot settings are easily configurable.

Plot name:

Although the data container names (Plot_L, Serie_M, Data_N) are auto-generated, the user can change these names by clicking on the related icon the new desired, entering the name in the Title box and pressing enter.

Figure 55: Title renaming example

When the plot is renamed, the new name will appear on top of the plot.





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NOTE: The names shall be different between all chart panels otherwise the references to the panels will be lost. This issue will be corrected on future release of SDV.

Plot color:

The user can also change the plot color, clicking on the Serie_N icon, the color menu appears.

Figure 56: color setting menu

Clicking on the Browse tab allows the user to select a color from the color table.

When setting the title color, the following dialog appears:

Figure 57: Plotter properties color setting

Select a color by clicking on one of color boxes. Then press OK to set the title to the selected color.

Clicking on the HSB tab, the following dialog appears:





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Figure 58: Plotter HSB color setting

The user can then set HSB color components by clicking in the H, S, or B menu box. To select the appropriate value, the user must maintain the left mouse button pressed on the cursor and drag it up or down.

Clicking OK will apply the color settings to the title.

Clicking on the RGB selection box will cause the following menu to appear:

Figure 59: Plotter RGB color setting

The user can then set the RGB components of the color by dragging the RGB cursors using the mouse button.

Clicking Ok will apply the color settings to the title.

Zoom in / Zoom out:





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It is possible to “Zoom-In” on a graph by clicking in the graph pane, maintaining the left mouse button clicked and dragging the mouse cursor down and to the right. The zoom-out can be performed dragging the mouse cursor upwards and to the left while maintaining the left mouse button clicked in.





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This section presents the L1A specific visualization features implemented by SMOSView. There are two L1A visualization features: the L1A visibility matrix and the star domain representation. The L1A specific visualization features apply only to the following L1A products:

L1A products

SM_XXXX_MIR_AFWD1A

SM_XXXX_MIR_AFWU1A

SM_XXXX_MIR_CRSD1A

SM_XXXX_MIR_CRSU1A

SM_XXXX_MIR_FWSD1A

SM_XXXX_MIR_FWSU1A

SM_XXXX_MIR_SC_D1A

SM_XXXX_MIR_SC_F1A

SM_XXXX_MIR_TARD1A

SM_XXXX_MIR_TARF1A

SM_XXXX_MIR_UAVD1A

SM_XXXX_MIR_UAVU1A

SM_XXXX_MIR_UNCD1A

SM_XXXX_MIR_UNCU1A

Table 3 L1A products to which L1A Specific Visualization Features apply

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In order to use the L1A visibility matrix, the user must select first a L1A product file using the File

Chooser buffer as presented in section 4.1 of this document.

The user can then click on the SMOS Specific Visualization Features Icon, the following window appears:





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Figure 60: L1A visibility matrix example

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The plot shows four rectangular matrixes representing the complex data displayed in the Data Field drop down menu, in this case CALIB_VISIB. The plot corresponds to the L1A calibrated visibilities presented in the SMOS Level 1 and Auxiliary Data Products Specifications. The plots show:



Upper left plot: Real part of the complex L1A data



Upper right plot: Imaginary part of the complex L1A data



Lower left plot: Amplitude of the complex L1A data



Lower right plot: Phase of the complex L1A data

Four rectangular matrixes are displayed, one matrix per real / imaginary / amplitude or phase of the complex number selected by the drop down menu of the selector field. The lower part of each matrix is filled out with the complex conjugate part of the upper part. Each value extracted from the product is represented using a grey level scale.

NOTE:

In the case of CRSx1A products, the Amplitude matrix shows the consolidated averaged FWF Origin amplitude (Cons_Ampl_FWF_Origin), and shall consist of 1 data set record. This structure shall





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(FWF Origin amplitude only).

The Phase matrix shows the Cons_Phase_FWF_Origin structure consisting in a number of data set records with parameters obtained after correlated noise injection in odd and even sources during FWF

Origin or Local Oscillator Calibration Sequences. There shall be as many Data Set Records as LO Phase

Tracking events plus FWF Origin Sequences.

User will be able to navigate through all the phase measurements, however the Amplitude shall remain constant.

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F e a t u r e s a v a i i l l a b l l e

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It is possible to “Zoom-In” on a graph by clicking in the graph pane, maintaining the left mouse button clicked and dragging the mouse cursor down and to the right. The zoom-out can be performed dragging the mouse cursor upwards and to the left while maintaining the left mouse button clicked in.

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H i i d e p a r r a m e t t e r r s s t t o m a g n i i f f y v i i s s u a l l i i z e d d a t a

:

:

Each feature has such a magnifying glass sign before: . The user can hide/unhide the functionality’s parameters by clicking on this magnifying glass. It allows the user to save space on the screen to better observe the data. When the functionality’s parameters are hidden the icon slightly turns:

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Figure 61: Plot Type drop down menu

The user can select two different plot types using this drop down menu, Square Matrix or Star Domain visualization.





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S n a p s s h o t t a n d t t i t t l e s s e t t t t i i n g s s

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Figure 62: Snapshot setting details

Snapshot settings give information concerning the current snapshot to the user:

-

Universal Time Coordinated (UTC) of the snapshot

-

Polarization of the snapshot (H: Horizontal, V: Vertical)

-

Data field: plotted data fields are predefined. In the case of MIR SC D1A, the L1A specific visualization features, only the data field CALIB_VISIB is available. But the user can select a

UNC 1A product. In this case, the Data field drop down menu offers two predefined data fields to be visualized using the L1A specific visualization features: MEAN_OFFSETS and

UNC_OFFSET_CORRECTION. The user simply needs to click on the data fields he wants to visualize.

Figure 63: Data field drop down menu example

- Title settings: allow the user to overwrite the title displayed above the real, imaginary, amplitude, and phase matrices. It is useful especially to export these matrices towards various formats (see next paragraph).

In the release 1.6.0 of SDV it has been included in this panel further more information regarding the product.



MIR_UAVx1A

Start_Time, Stop_Time, Correlator_Layer, Samples, Software_Error_Counter,

Instrument_Error_Counter, ADF_Error_Counter, Calibration_Error_Counter



MIR_CRSx1A

Start_Time, Stop_Time, Correlator_Layer, Samples, Time_From_ANX ,Software_Error_Counter,

Instrument_Error_Counter, ADF_Error_Counter, Calibration_Error_Counter



MIR_SC_x1A / MIR_TARx1A





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Snapshot_Time, Snapshot_ID Snapshot_OBET , Antenna_Boresight, Max_Mkj_module, X –Band,

Software_Error_flag, Instrument_Error_flag, ADF_Error_flag, Calibration_Error_flag



MIR_SC_x1B / MIR_TARx1B

Snapshot_Time, Snapshot_ID Snapshot_OBET , Antenna_Boresight, X

–Band,

Software_Error_flag, Instrument_Error_flag, ADF_Error_flag, Calibration_Error_flag

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Figure 64: Value Details display

When the user drags the mouse over the plot, the complex values corresponding to the point under the mouse cursor are displayed in the Value Details box.

R: real part; I : Imaginary part; M: Magnitude (Amplitude); P: Phase.

X and Y are the line and column number.

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E x p o r r t t

The user can use the Export box to export the displayed screen in various image, postscript, or PDF formats.

Figure 65: Export Box

Click on “Export”. An export format box opens (Figure 66); then select the path and name of the file to

be created, and the format to which you would like to export the matrices. An example of the JPG result

is given in Figure 67.





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Figure 66 Export formats

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Figure 67 JPG export result

The user can step through the product and visualize consecutive snapshots contained inside the product, as explained at the end of this section. One way of identifying snapshots is the OBET, associated with a snapshot.

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The matrix values are displayed using a grey level scale, but the user can use color tables to display matrixes using false color. Clicking on the Color Tables tab in each matrix will display a predefined selection of color tables:





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Figure 68: Color Tables menu

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Figure 69: Color table example

Clicking on the selected color table will assign the selected color table to the plot. The matrix plot is then updated.

Figure 70: L1A matrix representation using a color table

The user can visualize the color scale just next to the plot, by ticking the box “Display color scale in

plot”. As shown in Figure 71, the color scale appears on the right of the plot with the range of values.

The user can display or not this color scale in the plot by ticking / unticking the option. It allows the user to save screen space to visualize the data.





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Figure 71 “Display color scale in plot” selected

The user can also select the minimum and maximum of the range to be displayed within the color table:

- by moving the sliders located above and below the table color or

- by entering new minimum and maximum values in the box and pressing “Enter”

- by entering new minimum and maximum values and selection “Scale” option. This way the color values will be redefined according to the user defined range instead of the minimum and maximum of the product.

An example of the same matrix than above is given in Figure 72, instead of the whole range [-6.427;

2.978], only the values between 1 and 2 (see color scale in plot) are displayed within the whole dynamic of the color scale.





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Figure 72 Min and max color scale range selection

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S t t e p p i i n g t h r o u g h t t h e p r r o d u c t t

The user can step through the data product and plot the next snapshot using the slider at the bottom of the plot. The user can also use the two buttons “-“ / “+” to step through the product and visualize consecutive snapshots.

Figure 73: Snapshot slider

To use the slider, click with the left mouse button on the slider, maintain the button clicked and drag the mouse cursor along the slider bar. To use the - / + buttons to step though the product and see consecutive snapshots, click on the – or + buttons.





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Using the Plot Type tab, select the Star Domain visualization, the following plot appears:

Figure 74: Start Domain visualization example

The plot shows Start Domain representation of the selected Data Field (in this case CALIB_VISIB).

The features available for the “star domain visualization” are the same as the ones available for the

“square matrix” representation:



Zoom in / Zoom out: see page 62



Hide parameters to magnify visualized data: see page 62

Functions on the left hand side pane are the same:

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Plot Type: see page 62(To Change to Spatial Representation)

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Snapshot and title settings: see page 63

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Value details: see page 64

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Export to image or postscript formats: see page 64

The Color Table function under each plot is also the same: see page 65.

The Stepping through the product with the Snapshot slider is also the same: see page 68.





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This section presents the L1B specific visualization features implemented by SMOSView. There are two L1B visualization features:

- the Fourier components of Brightness Temperature (BT) representation (or L1B star domain)

- the reconstructed BT (or L1B spatial representation)

The mathematical details associated with these representations are fully detailed in the SMOSView specification document. The L1B specific visualization features apply only to the following L1B products:

L1B products

SM_XXXX_MIR_SC_D1B

SM_XXXX_MIR_SC_F1B

SM_XXXX_MIR_TARD1B

SM_XXXX_MIR_TARF1B

Table 4 L1B products to which L1B Specific Visualization Features apply

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L 1 B F o u r i i e r C o m p o n e n t t s o f f B r i i g h t t n e s s s T e m p e r a t t u r e

In order to visualize the Fourier components of BT, the user must select first a L1B product file using

the File Chooser buffer as presented in section 4.1 of this document.

The user can then click on the SMOS Specific Visualization Features Icon , the following window appears:





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Figure 75: L1B Fourier Components of BT example

This plot is of the same type as the Star Domain plot for L1A.

The controls associated with this plot are the same than the previous ones:

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-





Plot Type:

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For L1B data, the plot type menu allows the user to switch between Fourier Components of BT representation and the spatial reconstructed BT:

Figure 76 L1B Plot type menu





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





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The Color Table function under each plot is also the same: see page 65.


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L 1 B R e c o n s t t r u c t t e d B r i i g h t t n e s s T e m p e r a t t u r e

Using the Plot Type menu, the user can select the Spatial Representation of L1B: “Reconstructed_BT”.

This plot type is not a simple visualization of L1B data but show features that have been derived from the L1B data by a procedure described in Appendix C.

Figure 77: L1B Spatial Representation example

The reconstructed BT plot type shows four hexagonal spatial representations of the L1B complex data field displayed in the Snapshot Settings box.

The controls associated with this plot are the same than the previous ones:

-






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-



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Plot Type: see page 71

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The Color Table function under each plot is also the same as for L1A: see page 65.






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This section presents the L1C specific visualization features implemented by SMOSView. The L1C specific visualization features apply only to the following L1C products:

L1C products

SM_XXXX_MIR_SCLD1C

SM_XXXX_MIR_SCSD1C

SM_XXXX_MIR_SCLF1C

SM_XXXX_MIR_SCSF1C

SM_XXXX_MIR_BWLD1C

SM_XXXX_MIR_BWLF1C

SM_XXXX_MIR_BWSD1C

SM_XXXX_MIR_BWSF1C

Dual Polarization reconstructed BT swath

Full Polarization reconstructed BT swath

Browse BT products

Table 5 L1C products to which L1C Specific Visualization Features apply

Note from the SMOS Level 1 and Auxiliary Data Products Specifications:



The dual polarization reconstructed brightness temperature swaths are L1C products obtained from

L1B products in dual polarization mode. It is organized in grid points (belonging to the Digital

Global Grid DGG).



The full polarization reconstructed brightness temperature swaths are L1C products obtained from

L1B products in full polarization mode. It is organized in grid points (belonging to the Digital

Global Grid DGG).



The Browse Brightness Temperature L1 data products are arranged in pole-to-pole swaths according to ascending and descending passes. Each grid point contains a brightness temperature sample interpolated from MIRAS measurements at an incidence angle of 42.5º.



The values of the Incidence Angles, Azimuth Angle, Faraday Rotation Angle and Geometric

Rotation Angle are now presented in Engineering units in the Browser and also in the Visualization panel.

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In order to use the L1C Dual polarization specific visualization features, the user must select first a L1C dual polarization product file using the File Chooser buffer as presented in section 4.1 of this document.






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Figure 78 L1C Specific Visualization Feature Window

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P l l o t t y p e

On the left panel, there are several controls. The upper left one is the plot type. For L1C products, there are two options: Pixel Attributes Projection or Measurement Counter Projection, as shown in the Plot type menu below:

Figure 79 L1C Plot Type Menu

In case of Pixel Attributes Projection, it is possible to select the field to be plotted, and to request its projection for a given snapshot or for a given range of incidence angle. The relevant field to be plotted

has to be chosen from the "Attributes" menu (see Figure 80), the snapshot has to be selected from the

snapshot ID selector (see Figure 89), the incidence angle range has to be chosen from the incidence angle selector (see Figure 90).

In case of Measurement Counter Projection, there is no selection of incidence angle nor snapshot. The value displayed gives the number of snapshots in the product over each grid point.





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P i i x e l l A t t r i i b u t e s P r o j j e c t i i o n

WARNING: For big products (around 250 Mb) the time needed to project the data is quite long…

Please be patient!

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By default, the selected plot type is pixel attributes projection. It allows the user to visualize all the following L1C fields projected on the Earth map:

- FLAGS: indicate the polarization (H: Horizontal, V: Vertical),

- SNAPSHOT_ID: Unique identifier for the snapshot,

- BTVALUE: Brightness Temperature value over the current Earth fixed grid point (in K),

- RAD_ACC PIX: pixel radiometric accuracy

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Azimuth angle (0º if local North)

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Incidence Angle (0° if vertical)

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FARADY ROT ANGLE: Faraday Rotation Angle

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GEO ROT ANGLE: Geometric Rotation Angle

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Footprint axis 1: Elliptical footprint major semi-axis value.

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Footprint axis 2: Elliptical footprint minor semi-axis value.

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Footprint ratio: Ratio between footprint axis 1 and footprint axis 2.

Even if selected by default, to visualize such parameters projected on the Earth, the user must select it

by the “Attributes” drop down menu:

Figure 80 L1C Attributes Drop Down Menu

The value of the selected attribute is given inside the main pane in a little box next to the pixel covered by the mouse and the value is updated (with a less than 1 second refreshing time) when the mouse moves. After some 4 seconds over the same pixel, the value and the little box disappear, they can be

visualized again by moving the mouse. See example in Figure 81.





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All the pixels displayed in this figure refer to the same snapshot selected from the GUI.

The values of the field plotted correspond to the polarization of the snapshot. The polarization of the product is displayed lower part of the window, below the Snapshot ID.

Figure 81 Example of L1C BT value field displayed. All pixels displayed refer to the same snapshot (100619).

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When the mouse is moving through the projected data, the “Geo Tools” give the user useful geographical information about the current mouse position: Latitude, longitude, and about the grid information: Grid ID, grid latitude, grid longitude, and grid mask.

Note: the latitude/longitude grid information gives the position of the center of the grid ID, while the

“geo info” gives the exact cursor latitude/longitude.

Figure 82 L1C Geo Tools Box Details





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The default projection used is the Mercator projection. However, it is possible to visualize the data through other geographical projections such as Orthographic (North/South) or Gnomonic projections.

For example if data are located northern than 50° latitude North or southern than 50° latitude South, it is

much more suitable to use a North/South Orthographic projection (see Figure 84). The projection can be

selected through the Projections drop down menu:

Figure 83 Projections Drop Down Menu

Figure 84 North Orthographic projection example

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The L1C products are displayed using a grey level scale, but the user can use color tables to display L1C product using false color. Clicking on the Color Tables tab will display a predefined selection of color tables:





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Figure 85 Color Tables Menu

Clicking on the selected color table will assign the selected color table to the plot. The plot is then updated.

The color range is loaded by default with the Min and Max values calculated directly from the points displayed on the map, however the user can set those values using the Min and Max text fields and then clicking on the “Scale” tick box. Afterwards the points are redisplayed according to the new range.

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The user can use the Export box to export the displayed screen in various image, postscript, or PDF formats.

Click on “Export”. An export format box opens (Figure 86); then select the path and name of the file to

be created, and the format to which you would like to export the matrices. An example of the JPG result

is given in Figure 87.

Figure 86 Export Box





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Figure 87 Export formats drop down menu

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It is possible to “Zoom In”, to “Zoom out” on the product, and to move in each direction by using the

zoom in / out/ around tool (Figure 88):

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Zoom in: use the (+) magnifier (upper one) OR without the tool: directly in the graph pane maintain the left mouse button clicked and drag the mouse cursor down and to the right

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Zoom out: use the (-) magnifier (lower one)

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Go to the North / South: use the upper / lower arrow

- Go to the West / East: use the left / right arrow

- Center the plot on 0° latitude; 0° longitude: click on the point in the center of the tool.

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Center the plot on a point within the map: left-click once over the desired center

Figure 88 L1C Zoom in / out / around Tool

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The user can step through the data product and plot the next snapshot using the snapshot IF slider at the

bottom of the plot (Figure 89). The user can also use the two buttons “-“ / “+” to step through the

product and visualize consecutive snapshots. The user can also visualize only the data corresponding to the polarization of choice. Values for full polarization products are: HH, VV, HV_Real and HV_Img.

Values for dual polarization products are HH and VV.





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Figure 89 L1C Snapshot ID selector box

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The polarization information is given inside the snapshot ID selector box. For L1C dual product, the polarization can be HH or VV.

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The user can select a range of incidence angle (0° if vertical incidence) by filling the L1C incidence

angle selector (Figure 90). The unit of the angle selector is millidegree (10

-3

degree), it means the same unit used inside the product. To define the incidence angle range, the user has to enter a minimum, a maximum value and the “central value”. In case multiple values fit inside the [min, max] range for a single pixel, the application will choose the data that are the nearest to the central value. To display only the data acquired with an incidence angle within the range, the user has then to click on “Display”.

Additionally, the user can narrow down the number of points to visualize by selecting the desired polarization. Values for full polarization products are: HH, VV, HV_Real and HV_Img. Values for dual polarization products are HH and VV.

Once the user has selected an incidence angle range, the image will display all the pixels of the file having the incidence angle within the range.

Figure 90 L1C Incidence Angle Selector

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M e a s u r e m e n t C o u n t e r

P r o j j e c t i i o n







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If the user selects the “Measurement Counter Projection” plot type, he will then visualize the field

“Counter” of the Swath_Snapshot_List data set. The field “Counter” specifies the number of Data Set

Record contained in it.

The value displayed in the small box when moving the mouse over the product gives the number of

snapshots in the product over each grid point. An example of such a counter is given in Figure 91.

Figure 91 Measurement Counter Projection L1C example

Note: The lower control pane for “Measurement Counter Projection” plot type only has the zoom in / out / around control.

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L 1 C F u l l l l p o l l a r i i z a t t i i o n v i i s u a l l i i z a t t i i o n

In order to use the L1C Full polarization specific visualization features, the user must select first a L1C

Full polarization product file using the File Chooser buffer as presented in section 4.1 of this document.

The user can then click on the SMOS Specific Visualization Features Icon , to use these features.

The L1C full polarization visualization features are exactly the same as the ones described in the

previous L1C dual polarization specific visualization features section. Please refer to section 8.1.





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The only parameter that changes compared to L1C dual product is the polarization. This information is also given inside the snapshot ID selector box. For L1C full product, the polarization can be HH, VV,

HV_real or HV_imaginary.

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B r r i i g h t t n e s s s T e m p e r a t t u r r e s s S p e c i i f f i i c P l l o t t

Once a brightness temperature map is obtained there is the possibility to display a graph showing the evolution of the BT vs the incidence angle for a selected grid point. This grid point is selected through the left click of the mouse.

Figure 92: BT vs Incidence Angle Selection Menu

There is the possibility to plot three different types of chart:

1. BT ToA: Brightness Temperature on Top of Atmosphere vs Incidence Angle

2. BT ToA + GR: Brightness Temperature on Top of Atmosphere with the Geometric Rotation vs

Incidence Angle.

3. BT ToA + GFR: Brightness Temperature on Top of Atmosphere with the Geometric Rotation and Fararday Rotation vs Incidence Angle

The of the geometric and faraday rotations where performed based on the multiplication presented below. The T3’ and T4’ is the real and imaginary part of the BT value present in the product. G is the geometric rotation and F the Faraday rotation angles.



Full Pol:





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

Dual Pol:

The graphs obtained are composed by two curves, one for the H polarization and another for the V polarization. Each curve has different colours and unique Y-axis scale to allow comparison. In the Full

Polarization case two extra curves are plotted. One for the HV_real and another for the HV_imaginary also as function of the incidence angle.

Figure 93: BT vs Incidence Angle Chart

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L 1 C b r o w s e p r o d u c t t s v i i s s u a l l i i z a t t i i o n

In order to use the L1C browse products specific visualization features, the user must select first a L1C browse product file using the File Chooser buffer as presented in section 4.1 of this document. The user can then click on the SMOS Specific Visualization Features Icon , the L1C browse products

visualization window opens. Figure 94 shows a L1C browse product for which the North orthographic

projection has been selected and a “blue-red” color table chosen):





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Figure 94 L1C browse product visualization example (North orthographic projection)

Note that for browse products, the controls in the lower pane are slightly different than the dual/full polarization ones. There is no incidence angle selection (all browse products have the same incidence angle) nor snapshot_ID selection.

The controls in the lower panel deal with:

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Zoom in / out / around tool (see page 80).

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Polarisation selector: allow the user to visualize products only from the selected polarization

(select the required polarization with the drop down menu).







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This section presents the L2 specific visualization features implemented by SMOSView. The L2 specific visualization features apply only to the following L2 products:

L2 products

SM_XXXX_MIR_OSUDP2

SM_XXXX_MIR_SMUDP2

Table 6 L2 products to which L2 Specific Visualization Features apply

Except two functionalities (the selection flags and the error mode) the L2 specific visualization features

apply also to auxiliary data files listed in Table 7.

WARNING: However the user should know that due to the incredible points to project on the map, the auxiliary files could take about 30 minutes to be displayed.

Auxiliary data products

AUX_DGG___ (Geodetic Product)

AUX_ECMWF (ECMWF Product)

AUX_DFFLAI_ (LAI Product)

AUX_DFFLMX (LAI MAX Product)

AUX_DGGTLV (Current Tau Nadir LV Product)

AUX_DGGTFO (Current Tau Nadir FO Product)

AUX_DGGROU (Current Roughness H Product)

AUX_DGGRFI_SPH (RFI Product)

AUX_DGGFLO_SPH (Current Flood Product)

AUX_GAL_SM_SPH (Galaxy Map Product convolved with the AUX_MN_WEF)

AUX_SOIL_P_SPH (Soil Properties Product)

AUX_BIGBWF_SPH (Big water body flag Product)

AUX_RFI______SPH (L1 RFI Product)

AUX_GAL_OS_SPH (Galactic Map Product convolved with the AUX_WEF)

AUX_DISTAN_SPH (Land Sea Mask) AUX_SSS____SPH (SSS Climatological LUT)

AUX_FARA_ (Faraday Rotation)

AUX_GAL_OS (Ocean Salinity Galaxy Map)

AUX_GAL_SM (Soil Moisture Galaxy Map)

AUX_OTTxD/F (Ocean target transformation)

AUX_DTBCUR (Current Delta TB Product)

AUX_DTBXY (Delta TBs for the L2OS post-processor)

Table 7 L2 products to which L2 Specific Visualization Features apply

In order to use the L2 specific visualization features, the user must select first a L2 Soil Moisture or

Ocean Salinity product file using the File Chooser buffer as presented in section 4.1 of this document.





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Figure 95 L2 specific visualization feature window

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C o n t t r o l l s f f r r o m l l e f f t t p a n e

The controls of the control panel on the left are described hereafter:

SMOSView allows projecting all fields and their associated errors from Level 2 Ocean Salinity User

Data Product (MIR_OSUDP2) and Level 2 Soil Moisture User Data Product (MIR_SMUDP2). The tables below list all these fields:

OSUDP2 Field Description

SSS1

SSS2

SSS3

WS

SST

Tb_42.5H

Sea surface salinity using roughness model 1



Equivalent neutral wind speed as derived from ECMWF

Sea Surface Temperature as derived from ECMWF

Brightness Temperature at surface level derived with default





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Tb_42.5V Brightness Temperature at surface level derived with default forward model and Retrieved geophysical parameters, V polarisation direction.

Table 8 L2 Ocean Salinity fields that can be projected on the geographical map

L2 SM Field Description

Soil_Moisture

Optical_Thickness_Nad

Physical_Temperature

TTH

RTT

Scattering_Albedo_H

DIFF_Albedos

Retrieved soil moisture value

Nadir optical thickness estimate for vegetation layer

Surface equivalent temperature – may be a retrieved value or from an external source

Optical thickness coefficient for polarisation H

Ratio of optical thickness coefficients TTH/TTV

Scattering albedo for horizontal polarisation

Difference of albedos ωH-ωV

Roughness_Param

Dielect_Const_MD_RE

Dielect_Const_MD_ IM

Dielect_Const_Non_MD_RE

Roughness parameter estimate

Real part of the dielectric constant from MD retrieval.

Imaginary part of dielectric constant from MD retrieval

Real part of dielectric constant from retrieval models other than MD

Dielect_Const_Non_MD_IM Imaginary part of dielectric constant from retrieval models other than MD

TB_ASL_Theta_B_H Surface level TB (corrected from sky/atmosphere contribution) computed from forward model with specific incidence angle

θ_B (42.5 °), and for H polarisation.

TB_ASL_Theta_B_V

TB_TOA_Theta_B_H

Surface level TB (corrected from sky/atmosphere contribution) computed from forward model a specific incidence angle θ_B

(42.5 °), and for V polarisation

Top of the atmosphere TB computed from forward model at specific incidence angle θ_B (42.5º), for H polarisation

TB_TOA_Theta_B_V Top of the atmosphere TB computed from forward model at specific incidence angle θ_B (42.5º), for V polarisation

Table 9 L2 Soil Moisture fields that can be projected on the geographical map





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F i i e l l d s e l l e c t i i o n

A field selection drop down menu allows the user to select the field to project on the map as shown in

Figure 96. Even if selected by default, to visualize such parameters projected on the Earth, the user

must select the field to be projected on the map by the “Field selection” drop down menu:

Figure 96 Field selection box (OS product on the left; SM product on the right)

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F l l a g s s e l l e c t i i o n

The user can select one or more flags available from the L2 product and overlay them to the displayed product. The available flags for the chosen product can be visualized in the flags selection box, as

displayed in Figure 97.

Figure 97 Flags selection box





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To select a flag to be overlaid to the image, the user must click in the left column box of the flag. The colour of the fag and the transparency are configurable.

To choose the color and the transparency of the flag to display the user must click in the second column starting left. The following menu is then displayed:

Figure 98 Flags color transparency menu

The user can choose the color of the flag in the “Swatches” tab: by clicking on the desired color (see

Figure 98). He can then select the transparency level in the “Transparency selection” tab: by moving the

slider to the transparency level desired (see Figure 99).

NOTE: Due to the use of a different point layer to display flags in the world map, sometimes during the zoom operations they may appear outside of the original position. In this case the zoom shall be performed prior to the display of the flags.





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Figure 99 Flags transparency selection menu

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G e o T o o l l s

When the mouse is moving through the projected data, the “Geo Tools” give the user useful geographical information about the current mouse position: Latitude, longitude, and about the grid information: Grid ID, grid latitude, grid longitude, and grid mask.

Note: the latitude/longitude grid information gives the position of the center of the grid ID, while the

“geo info” gives the exact cursor latitude/longitude.

See Figure 82.

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P r o j e c t i i o n s

The default projection used is the Mercator projection. However, it is possible to visualize the data through other geographical projections such as Orthographic (North/South) or Gnomonic projections.

See more details in section 8.1.2.3.

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F i i e l l d c o l l o r

S c a l l e

The user can select the color table that will be affected to the field to be projected thanks to the Field

color scale. The user has to select a color table within the drop down menu of Figure 100.





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Figure 100 L2 field color scale

The color range is loaded by default with the Min and Max values calculated directly from the points displayed on the map, however the user can set those values using the Min and Max text fields and then clicking on the “Scale” tick box. Afterwards the points are redisplayed according to the new range.

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E x a m p l l e

Once the field, the color tables and the projections selected, the following window displays the L2 data on the geographical map:

Figure 101 L2 OS product visualization example





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L2 specific visualization features include an “error mode” that allows the user to display and project on the map the associated error contained in the L2 product (e.g. DQX) to the field selected (e.g. soil moisture), above the field itself. To use the error mode, the user has to choose the error mode by clicking on the “Error mode” icon below the main panel:

Figure 102 Click on the “Error Mode” icon to start the error mode

Once displayed, the user can as previously navigate through the projected data using the zoom in / out /

around tool of Figure 102.

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E r r o r c o l l o r s c a l l e

The color scale of the error displayed above the field projected can be chosen among various color tables thanks to the “Error color scale” drop down menu:

Figure 103 Error color scale

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E r r o r m o d e e x a m p l l e

To use the error mode, the user has first to project one field using the features of the previous section

“Field selection”, page 89.

Once the error mode selected and the color table selected, the user can simply left-click on the area where he would like the error to be displayed above the projected data. The error is then displayed

above the data, all around the clicked position as seen in Figure 104 hereafter.





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Figure 104 Error mode display above SSS field

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Due to the fact that this AUX_SSS and AUX_DISTAN files have a huge number of points (cover the whole DGG grid) and SMOS View visualization plugin memory limitations don’t allow the simultaneous display of a so large number of points, the display of data is perfo r med zone by zone. In total there are 6 zones available

A new panel was created below the world map containing the available zones.





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F i i g u r e 1 0 5 A U X _ S S S Z o n e P a n e l l D u m m y D a t a

F i i l l t e r i i n g

Some SMOS products like L2 and AUX are filled with dummy data, which is initialization values that are kept in the final product. In most of the cases those values don’t have a n important meaning, therefore it was found the need of don’t display them in the world map.

The values considered as dummy are the following:



-999



-99999



-99998

By default, the specific visualization feature do es n’t consider this values on the world map, however the user is able to display them.

To display the dummy values on the world map the user must select the option “Display DUMMY

Values” present on the “Tools” panel, located below the world map.

Figure 106 Display DUMMY Values Option

The values are then displayed in the world map with color “Black”, in order to clearly idetify them, the color scale shall be different than the “Black and White”, if for some reason the “Black and White” scale its set it should be changed to another that doesn’t contains the black colour. The dummy values are then added and shown within the values layer. If the user unselect s the option, then world map will be repainted without the dummy values.

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V i i s u a l l i i z a t i i o n o f A U X _ F A R A P r o d u c t s

The main purpose of this ADF is to provide the L2OP with a more precise computation of the Faraday angle based on algorithm improvements and refined VTEC background field (i.e the combined VTEC).

In addition the Faraday rotation auxiliary file can be used in any of the DPGS sub/system, and allows de-coupling L1 reprocessing activity for algorithm upgrades and availability of a more precise Faraday rotation (i.e. VTEC combined, usage of refined geomagnetic model).This ADF has the following types:



AUX_FARA_C (Consolidated Faraday Rotation)



AUX_FARA_P (Predicted Faraday Rotation)



AUX_FARA_R (Rapid Faraday Rotation)





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SMOS Data Viewer provides the possibility for the user to perform a specific visualization in a panel similar to L1C (snapshot by snapshot basis) but without the polarization filter. The following figure present s a screenshot of a visualization showing on the left side the variables available for the user.

Figure 107: AUX_FARA Specific Visualization

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V i i s u a l l i i z a t i i o n o f A U X _ G A L _ O S a n d A U X _ G

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The specifi c visualization of AUX_GAL_OS and AUX_GAL_SM is performed on a (Ra, De) chart with

721x1441 elements. On the AUX_GAL_OS the chart will display the corresponding TB_Sky_H (Sky

TB for Horizontal Polarization) and TB_Sky_V (Sky_TB for Vertical Polarization) values for each

Right Ascension (Ra), Declination (De) pair of coordinates.

For the AUX_GAL_SM the visualization panel is divided in four charts:



I_CSWeF (First Stokes Parameter)



Q_CSWeF (Second Stokes Parameter)



U_CSWeF (Third Stokes Parameter)



Delta_I (Potential Error Due to Strong Noise Sources)

Due to jFreeChart limitations the Ra and De coordinates have a step of 0,5. The Ra ranges are from 0.0 to 360.0 while the De are from -90.0 to 90.0.





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It must be noted that due to performance issues, the zoom and color scale operati o ns are performed slowly.

Figure 108: AUX_GAL_OS Specific Visualization

Figure 109: AUX_GAL_SM Specific Visualization





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The specific visualizatio n of AUX_OTT data is performed on (Xi, Eta) charts divided by ascending and descending orbit. The visualization panel is divided in four plots, the two on the left have the Ascending orbit and the two on the right the Descending orbit.

The values shown on the “Value Details” panel are according to the organization of the visualization panel.

By default the color scale range is set to [-10.0, 10.0], if the user uncheck the “Scale” option the scale range will be set to the minimum and maximum values of the plots.

For dual polarization products the only four plots displayed are:



LUT_offset_HH_A on the top left panel.



LUT_offset_HH_D on the top right panel.



LUT_offset_VV_A on the bottom left panel.



LUT_offset_VV_D on the bottom right panel.

The following picture shows the visualization panel for the dual polarization product.

Figure 110: AUX_OTT Dual Pol Specific Visualization

For the Dual Polarization case the user is able to select the following polarization filters:



HH VV



Same plots as the dual polarization case



HH_short VV_short



LUT_offset_HH_short_A on the top left panel.





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

LUT_offset_HH_short_D on the top right panel.



LUT_offset_VV_short_A on the bottom left panel.



LUT_offset_VV_short_D on the bottom right panel.



HH HH_short



LUT_offset_HH_A on the top left panel.



LUT_offset_HH_D on the top right panel.



LUT_offset_HH_short_A on the bottom left panel.



LUT_offset_HH_short_D on the bottom right panel.



VV VV_short



LUT_offset_VV_A on the top left panel.



LUT_offset_VV_D on the top right panel.



LUT_offset_VV_short_A on the bottom left panel.



LUT_offset_VV_short_D on the bottom right panel.



T3_HHV T4_HHV



LUT_offset_T3_HHV_A on the top left panel.



LUT_offset_T3_HHV_D on the top right panel.



LUT_offset_T4_HHV_A on the bottom left panel.



LUT_offset_T4_HHV_D on the bottom right panel.



T3_VVH T4_VVH



LUT_offset_T3_VVH_A on the top left panel.



LUT_offset_T3_VVH_D on the top right panel.



LUT_offset_T4_VVH_A on the bottom left panel.



LUT_offset_T4_VVH_D on the bottom right panel.

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V i i s u a l l i i z a t i i o n o f A U X _ D T B C U R

The specific visualization of AUX_DTBCUR data is performed on (Xi, Eta) charts divided in four plots,

XX, YY (top) and XX Short, YY Short (bottom). The user can select other polarization filter (XY) where the four plots will be XXY Stokes 3 and XXY Stokes 4 (top), YYX Stokes 3 and YYX Stokes 4

(bottom).

Apart from the polarization, the user is able to select as well the orbit, model and variable

(count_deltaTB, deltaTB, std_deltaTB or flags) to plot.

The values shown on the “Value Details” panel are according to the organization of the visualization panel.





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By default the color scale is range is “Blue-White-Red” and the range is set to [-10.0, 10.0], if the user uncheck the “Scale” option the scale range will be set to the minimum and maximum values of the plots.

Figure 111 : AUX_DTBCUR Specific Visualization

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V i i s u a l l i i z a t i i o n o f A U X _ D T B X

Y

The specific visualization of AUX_DTBXY can be performed through three different panels selected by the user on the Graphics Type box:



Plot Panel (Default): Showing the OTTs as it is done for the AUX_DTBCUR.



World Map Panel: Showing the Snapshot through a ground track representation.



Charts Panel: Show the A3TEC variables through four X-Y plots.

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P l o t t P a n e l l

Please refer section 9.2.8

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W o r l l d M a p P a n e l l

On this panel the user is able to see several snapshot variables over the world map. The user can select the Region ID, FOV Zone, Polarization and Model. The supported variables are meas_count, delta_TB, model_TB and flags.





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Figure 112 : AUX_DTBXY World Map

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In this specific visualization the user is able to select the A3TEC variables (latTEC, l1cTEC, tecres, signpost) to be plotted against fovlatitude (top-left), fovLongitude (top-right), geoLatitude (bottom-left), geoLongitude (bottom-right).

Figure 113 : AUX_DTBXY Charts Panel





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Windows, MacOS X

No particular requirements should be needed.



Linux, UNIX

It is necessary to have the CUPS package installed.

This package is by default installed on most UNIXes and it is freely downloadable from the following website: http://www.cups.org/





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Phase is calculated using the atan2 function provided by the standard Java library.

The code that executes this operation is the following:

if (_realPart != 0.0 || _imaginaryPart != 0.0)

_phase = Math.atan2(_imaginaryPart, _realPart);

else

_phase = 0.0f;

To comply with Enhancement 8 (ref. SO-MN-VEG-GS-0050 page 5), the value of the phase is set to 0 when real and imaginary values are 0.

The documentation of the atan2 routine is the following:

The routine converts rectangular coordinates (x, y) to polar (r, theta). This method computes the phase

theta by computing an arc tangent of y/x in the range of -pi to pi. Special cases:



If either argument is NaN, then the result is NaN.



If the first argument is positive zero and the second argument is positive, or the first argument is positive and finite and the second argument is positive infinity, then the result is positive zero.



If the first argument is negative zero and the second argument is positive, or the first argument is negative and finite and the second argument is positive infinity, then the result is negative zero.

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If the first argument is positive zero and the second argument is negative, or the first argument is positive and finite and the second argument is negative infinity, then the result is the double value closest to pi.



If the first argument is negative zero and the second argument is negative, or the first argument is negative and finite and the second argument is negative infinity, then the result is the double value closest to -pi.



If the first argument is positive and the second argument is positive zero or negative zero, or the first argument is positive infinity and the second argument is finite, then the result is the double value closest to pi/2.





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

If the first argument is negative and the second argument is positive zero or negative zero, or the first argument is negative infinity and the second argument is finite, then the result is the double value closest to -pi/2.



If both arguments are positive infinity, then the result is the double value closest to pi/4.



If the first argument is positive infinity and the second argument is negative infinity, then the result is the double value closest to 3*pi/4.



If the first argument is negative infinity and the second argument is positive infinity, then the result is the double value closest to -pi/4.



If both arguments are negative infinity, then the result is the double value closest to -

3*pi/4.

Parameters:

y - the ordinate coordinate x - the abscissa coordinate

Returns:

the theta component of the point (r, theta) in polar coordinates that corresponds to the point (x, y) in

Cartesian coordinates.





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Technical note provided by Indra:

The visualization of the L1B product in (chi,eta) domain requires some transformations. The steps to be followed are these:

1. The starting point are the L1B product’s fields:



Scene_BT_Fourier (field number 17), which contains the information to be plotted,



and Flags (field number 16) which contains information on the polarization of

Scene_BT_Fourier.

2. Scene_BT_Fourier has a number of elements that varies depending on the product and polarization mode:

1. Dual polarization product (SM_XXXX_MIR_SC_D1B or SM_XXXX_MIR_TARD1B): o the Scene_BT_Fourier field in this product has only pure polarizations, HH or VV.

It has 1395 complex values and one real in the centre of the star. These are contained in the product as 2791 double elements.

2. Full polarization product (SM_XXXX_MIR_SC_F1B or SM_XXXX_MIR_TARF1B): the

Scene_BT_Fourier field in this product has 4 possibilities o HH or VV: it has 1395 complex values and one real in the centre of the star (2791 doubles totally). o HV_real or HV_imag: it has 2791 real values (doubles) covering all the star, either the real part of HV polarization or the imaginary part.

3. In dual polarization products it must be performed the complex conjugate of the

Scene_BT_Fourier fields in pure polarizations to complete the star in the hexagonal domain.

In case of a full polarization product instead of the complex conjugate, the real part is obtained through the 2791 real values of HV_real and the imaginary part is obtained through the 2791 real values of HV_imag.

I call this Scene_BT_Fourier*. This follows the same order as Scene_BT_Fourier.

4. The resulting variable, which I call CompleteStar_Scene_BT_Fourier, is a list of values to be visualized in the hexagonal star domain plot (this is the variable to be visualized by feature specified in SOW’s Req. SDV-T-6.1.6-120). The order and coordinates for the complete list of points in the star is specified in LUT L1B_STARVIS_LUT.txt.

5. The variable CompleteStar_Scene_BT_Fourier is the origin for the Brightness Temperature image in the (chi,eta) domain in whatever resolution (specified by Xi_Eta_Resolution field

#64 in Table 4-28 of L1OP Specs), although obviously some transformations are needed in





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Inverse FFT procedure.

6. In order to use standard FFT techniques, the CompleteStar_Scene_BT_Fourier variable must be fitted into a square matrix of the specified Xi_Eta_Resolution, I call this matrix

Rectangular_Scene_BT_Fourier. To do this, the following procedure must be performed:



Create the variable Rectangular_Scene_BT_Fourier whose size is Xi_Eta_Resolution rows by Xi_Eta_Resolution columns, filled with all zeroes. There are 3 possible resolutions, 64x64, 128x128, and 256x256.



Use the look up table (L1B_UV_STAR2RECT_LUT_***.txt) to find the positions in

Rectangular_Scene_BT_Fourier rectangular matrix on which the elements of

CompleteStar_Scene_BT_Fourier have to be placed. First 2 columns contain the row and column indexes in the rectangular grid, the 3 rd

and 4 th

columns contain the corresponding

(u,v) coordinates values, and the 5 th

column contains the position of the corresponding element of CompleteStar_Scene_BT_Fourier variable. In fact, you don’t need columns

3 rd

and 4 th

, they are only included for clarification purposes.



Note that some of this column 5’s positions values are set to -001: this must be understood as that the Rectangular_Scene_BT_Fourier must be kept with zero values. In fact,

Rectangular_Scene_BT_Fourier is zero-padded rectangular version of

CompleteStar_Scene_BT_Fourier. The hexagonal-grid variable is always the same size, the change in resolution in the rectangular-grid variable is achieved by zero-padding.

7. Once you have the rectangular-grid variable, you must perform an Inverse FFT. The L1PP project has used the FFTW library methods:

p = fftw_plan_dft_2d(nx, ny, bt_freq_matrix, bt_temp_snapshot,

FFTW_BACKWARD,FFTW_ESTIMATE);

Where nx and ny are the number of rows and columns in the rectangular grid, bt_freq_matrix is the Rectangular_Scene_BT_Fourier and bt_temp_snapshot the resulting variable in the

(chi,eta) domain, which I call from now on Rectangular_Scene_XiEta.

8. The variable Rectangular_Scene_XiEta has the same size of

Rectangular_Scene_BT_Fourier. Rectangular_Scene_XiEta has to be plotted against the coordinates specified in look-up tables L1B_FFT_XIETA_LUT_***.txt. The first 2 columns give the indexes in the rectangular matrix, and columns 3 rd

and 4 th

give the corresponding Xi and Eta positions.

9. You have to plot all values in the Rectangular_Scene_XiEta variable, as scientists are interested in everything that is retrieved by the SMOS instrument, even if it is hardly usable with current algorithms.

10. The reconstruction in the xi,eta domain is implemented using the Blackman apodisation window, therefore the brightness temperature is calculated by the following approach:





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The Star Domain representation is performed based on the Square Matrix. The ordering is based on reporting only the baselines with positive v coordinate and u positive for v=0:



The v coordinate for the upper half of the baselines goes continuously from 0 to sqrt(3)*NEL*d, where NEL=21 and d=0.875, in incremental steps of sqrt(3)*d/2



The u coordinate of the upper half of the baselines shall follow the mathematical rules defined as:



If v=0, then u goes from d to 24*d in incremental steps of d



If v>0 and v<=sqrt(3)*NEL*d/2, then u goes from –(NEL*d +v/sqrt(3)) to +(NEL*d +v/sqrt(3)) in incremental steps of d



If v=sqrt(3)*(NEL+1)*d/2, then u goes from –11*d to +11*d in incremental steps of d



If v=sqrt(3)*(NEL+2)*d/2, then u has the values –23*d/2, –19*d/2 to +19*d/2 in incremental steps of d and +23*d/2. Notice that the elements ±21*d/2 are not present.



If v=sqrt(3)*(NEL+3)*d/2, then u has the values –12*d, –9*d to +9*d in incremental steps of d and +12*d. Notice that the elements ±11*d and ±10*d are not present.



Finally, if v>sqrt(3)*(NEL+3)*d/2 and v<=sqrt(3)*NEL*d, then u goes from –(NEL*d – v/sqrt(3)) to +(NEL*d –v/sqrt(3)) in incremental steps of d

The order followed is shown in the next picture. For the 1395 element vector, the baselines shall be taken first from left to right, then from bottom to top. I.e. the first 24 elements are the ones with v=0 and ordered by increasing u; the next 42 elements are the ones with v=sqrt(3)*d/2 and ordered by increasing u (from negative to positive), and so on until the 1395 elements are covered.

Figure 114: Star Domain Representation





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For the case of HV polarisation, where the vector is 2791 elements long, the complete star must be covered. In this case, the ordering shall be similar to the one adopted above. The first element shall be the zero baseline (u=0, v=0); the next 1395 elements shall be ordered like it has been described (left to right, then bottom to top); and the remaining 1395 element shall be ordered in the same way as well, but inverting the sign of the resulting u and v coordinates (i.e. it changes to ordering from right to left, then top to bottom).





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In order to be possible to correctly browse and plot variables for level 0 products, some changes have been made to the XIN schema to split the I Q correlations in smaller arrays. The following table presents the array index number and the corresponding correlation.

Array Index Correlation

25 I24_I3 51 I23_I3

26 I24_I2 52 I23_I2

Correlator_Counts_1

1 1_1-0 27 I24_I1 53 I23_I1

I24_I18

I24_I17

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118

111

112

113

114

107

108

109

110

103

104

105

106

99

100

101

102

95

96

97

98

91

92

93

94

87

88

89

90

I68_I21

I68_I20

I68_I19

I68_I18

I68_I17

I68_I16

I68_I15

I68_I14

I69_I3

I69_I2

I69_I1

I69_0

I68_1

I68_I24

I68_I23

I68_I22

I69_I11

I69_I10

I69_I9

I69_I8

I69_I7

I69_I6

I69_I5

I69_I4

I69_I19

I69_I18

I69_I17

I69_I16

I69_I15

I69_I14

I69_I13

I69_I12


I67_I15

I67_I14

I67_I13

I67_I12

I67_I11

I67_I10

I67_I9

I67_I23

I67_I22

I67_I21

I67_I20

I67_I19

I67_I18

I67_I17

I67_I16

I68_I5

I68_I4

I68_I3

I68_I2

I68_I1

I68_0

I67_1

I67_I24

I68_I13

I68_I12

I68_I11

I68_I10

I68_I9

I68_I8

I68_I7

I68_I6

143

144

145

146

147

148

149

139

140

141

142

135

136

137

138

131

132

133

134

127

128

129

130

123

124

125

126

119

120

121

122



’

’ s M a n u a l l

I66_I10

I66_I9

I66_I8

I66_I7

I66_I6

I66_I5

I66_I4

I66_I18

I66_I17

I66_I16

I66_I15

I66_I14

I66_I13

I66_I12

I66_I11

I67_0

I66_1

I66_I24

I66_I23

I66_I22

I66_I21

I66_I20

I66_I19

I67_I8

I67_I7

I67_I6

I67_I5

I67_I4

I67_I3

I67_I2

I67_I1

174

175

176

177

178

179

180

170

171

172

173

166

167

168

169

162

163

164

165

158

159

160

161

154

155

156

157

150

151

152

153


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151 of 170

205

206

207

208

209

210

201

202

203

204

197

198

199

200

193

194

195

196

189

190

191

192

185

186

187

188

181

182

183

184

I65_I5

I65_I4

I65_I3

I65_I2

I65_I1

I65_0

I65_I13

I65_I12

I65_I11

I65_I10

I65_I9

I65_I8

I65_I7

I65_I6

I65_I21

I65_I20

I65_I19

I65_I18

I65_I17

I65_I16

I65_I15

I65_I14

I66_I3

I66_I2

I66_I1

I66_0

I65_1

I65_I24

I65_I23

I65_I22


27

28

29

30

23

24

25

26

19

20

21

22

15

16

17

18

11

12

13

14

7

8

9

10

Array Index Correlation

Correlator_Counts_24

1

2

I64_1

I64_I24

5

6

3

4

I64_I23

I64_I22

I64_I21

I64_I20

I64_I19

I64_I18

I64_I17

I64_I16

I64_I15

I64_I14

I64_I13

I64_I12

I64_I3

I64_I2

I64_I1

I64_0

I63_1

I63_I24

I63_I23

I63_I22

I64_I11

I64_I10

I64_I9

I64_I8

I64_I7

I64_I6

I64_I5

I64_I4



’

’ s M a n u a l l

59

60

61

62

55

56

57

58

51

52

53

54

47

48

49

50

43

44

45

46

39

40

41

42

35

36

37

38

31

32

33

34


I62_I23

I62_I22

I62_I21

I62_I20

I62_I19

I62_I18

I62_I17

I62_I16

I63_I5

I63_I4

I63_I3

I63_I2

I63_I1

I63_0

I62_1

I62_I24

I63_I13

I63_I12

I63_I11

I63_I10

I63_I9

I63_I8

I63_I7

I63_I6

I63_I21

I63_I20

I63_I19

I63_I18

I63_I17

I63_I16

I63_I15

I63_I14

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91

92

93

94

87

88

89

90

83

84

85

86

79

80

81

82

75

76

77

78

71

72

73

74

67

68

69

70

63

64

65

66

I61_I17

I61_I16

I61_I15

I61_I14

I61_I13

I61_I12

I61_I11

I61_I10

I61_1

I61_I24

I61_I23

I61_I22

I61_I21

I61_I20

I61_I19

I61_I18

I62_I7

I62_I6

I62_I5

I62_I4

I62_I3

I62_I2

I62_I1

I62_0

I62_I15

I62_I14

I62_I13

I62_I12

I62_I11

I62_I10

I62_I9

I62_I8


123

124

125

126

119

120

121

122

115

116

117

118

111

112

113

114

107

108

109

110

103

104

105

106

99

100

101

102

95

96

97

98

I60_I11

I60_I10

I60_I9

I60_I8

I60_I7

I60_I6

I60_I5

I60_I4

I60_I19

I60_I18

I60_I17

I60_I16

I60_I15

I60_I14

I60_I13

I60_I12

I61_I1

I61_0

I60_1

I60_I24

I60_I23

I60_I22

I60_I21

I60_I20

I61_I9

I61_I8

I61_I7

I61_I6

I61_I5

I61_I4

I61_I3

I61_I2

S o

S

f f t

M

t w

O

a

S

r e

D a

U s

t

s

a

e r r

’

’

V

s

i i e

M

w

a

e

n

r

u a l l

155

156

157

158

151

152

153

154

147

148

149

150

143

144

145

146

139

140

141

142

135

136

137

138

131

132

133

134

127

128

129

130


I59_I5

I59_I4

I59_I3

I59_I2

I59_I1

I59_0

I58_1

I58_I24

I59_I13

I59_I12

I59_I11

I59_I10

I59_I9

I59_I8

I59_I7

I59_I6

I59_I21

I59_I20

I59_I19

I59_I18

I59_I17

I59_I16

I59_I15

I59_I14

I60_I3

I60_I2

I60_I1

I60_0

I59_1

I59_I24

I59_I23

I59_I22

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187

188

189

190

183

184

185

186

179

180

181

182

175

176

177

178

171

172

173

174

167

168

169

170

163

164

165

166

159

160

161

162

I57_1

I57_I24

I57_I23

I57_I22

I57_I21

I57_I20

I57_I19

I57_I18

I58_I7

I58_I6

I58_I5

I58_I4

I58_I3

I58_I2

I58_I1

I58_0

I58_I15

I58_I14

I58_I13

I58_I12

I58_I11

I58_I10

I58_I9

I58_I8

I58_I23

I58_I22

I58_I21

I58_I20

I58_I19

I58_I18

I58_I17

I58_I16


199

200

201

202

203

204

205

195

196

197

198

191

192

193

194

11

12

13

14

7

8

9

10



1

2

I56_I2

I56_I1

5

6

3

4

I56_0

I55_1

I55_I24

I55_I23

I55_I22

I55_I21

I55_I20

I55_I19

I55_I18

I55_I17

I55_I16

I55_I15

I57_I9

I57_I8

I57_I7

I57_I6

I57_I5

I57_I4

I57_I3

I57_I17

I57_I16

I57_I15

I57_I14

I57_I13

I57_I12

I57_I11

I57_I10



’

’ s M a n u a l l

214

215

216

217

218

219

220

210

211

212

213

206

207

208

209

I55_I6

I55_I5

I55_I4

I55_I3

I55_I2

I55_I1

I55_0

I54_1

I55_I14

I55_I13

I55_I12

I55_I11

I55_I10

I55_I9

I55_I8

I55_I7

I56_I20

I56_I19

I56_I18

I56_I17

I56_I16

I56_I15

I56_I14

I57_I2

I57_I1

I57_0

I56_1

I56_I24

I56_I23

I56_I22

I56_I21

27

28

29

30

23

24

25

26

19

20

21

22

15

16

17

18


43

44

45

46

39

40

41

42

35

36

37

38

31

32

33

34

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225

226

227

228

221

222

223

224

229

230

231

I56_I13

I56_I12

I56_I11

I56_I10

I56_I9

I56_I8

I56_I7

I56_I6

I56_I5

I56_I4

I56_I3

I54_I16

I54_I15

I54_I14

I54_I13

I54_I12

I54_I11

I54_I10

I54_I9

I54_I24

I54_I23

I54_I22

I54_I21

I54_I20

I54_I19

I54_I18

I54_I17


75

76

77

78

71

72

73

74

67

68

69

70

63

64

65

66

59

60

61

62

55

56

57

58

51

52

53

54

47

48

49

50

I53_I10

I53_I9

I53_I8

I53_I7

I53_I6

I53_I5

I53_I4

I53_I3

I53_I18

I53_I17

I53_I16

I53_I15

I53_I14

I53_I13

I53_I12

I53_I11

I54_0

I53_1

I53_I24

I53_I23

I53_I22

I53_I21

I53_I20

I53_I19

I54_I8

I54_I7

I54_I6

I54_I5

I54_I4

I54_I3

I54_I2

I54_I1

S o

S

f f t

M

t w

O

a

S

r e

D a

U s

t

s

a

e r r

’

’

V

s

i i e

M

w

a

e

n

r

u a l l

107

108

109

110

103

104

105

106

99

100

101

102

95

96

97

98

91

92

93

94

87

88

89

90

83

84

85

86

79

80

81

82


I52_I4

I52_I3

I52_I2

I52_I1

I52_0

I51_1

I51_I24

I51_I23

I52_I12

I52_I11

I52_I10

I52_I9

I52_I8

I52_I7

I52_I6

I52_I5

I52_I20

I52_I19

I52_I18

I52_I17

I52_I16

I52_I15

I52_I14

I52_I13

I53_I2

I53_I1

I53_0

I52_1

I52_I24

I52_I23

I52_I22

I52_I21

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139

140

141

142

135

136

137

138

131

132

133

134

127

128

129

130

123

124

125

126

119

120

121

122

115

116

117

118

111

112

113

114

I50_I24

I50_I23

I50_I22

I50_I21

I50_I20

I50_I19

I50_I18

I50_I17

I51_I6

I51_I5

I51_I4

I51_I3

I51_I2

I51_I1

I51_0

I50_1

I51_I14

I51_I13

I51_I12

I51_I11

I51_I10

I51_I9

I51_I8

I51_I7

I51_I22

I51_I21

I51_I20

I51_I19

I51_I18

I51_I17

I51_I16

I51_I15


151

152

153

154

155

156

157

147

148

149

150

143

144

145

146

11

12

13

7

8

9

10



1

2

1_1-7

1_0-7

5

6

3

4

I72_I48

I72_I47

I72_I46

I72_I45

I72_I44

I72_I43

I72_I42

I72_I41

I72_I40

I72_I39

I72_I38

I50_I8

I50_I7

I50_I6

I50_I5

I50_I4

I50_I3

I50_I2

I50_I16

I50_I15

I50_I14

I50_I13

I50_I12

I50_I11

I50_I10

I50_I9



’

’ s M a n u a l l

26

27

28

22

23

24

25

18

19

20

21

14

15

16

17

166

167

168

169

170

171

172

162

163

164

165

158

159

160

161

I72_I29

I72_I28

I72_I27

I72_I26

I72_I25

I71_I48

I71_I47

I72_I37

I72_I36

I72_I35

I72_I34

I72_I33

I72_I32

I72_I31

I72_I30

I49_I19

I49_I18

I49_I17

I49_I16

I49_I15

I49_I14

I49_I13

I50_I1

I50_0

I49_1

I49_I24

I49_I23

I49_I22

I49_I21

I49_I20


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33

34

35

36

29

30

31

32

37

38

39

40

41

181

182

183

184

185

186

187

177

178

179

180

173

174

175

176

I71_I46

I71_I45

I71_I44

I71_I43

I71_I42

I71_I41

I71_I40

I71_I39

I71_I38

I71_I37

I71_I36

I71_I35

I71_I34

I49_I4

I49_I3

I49_I2

I49_I1

I49_0

0_1-6

0_0-6

I49_I12

I49_I11

I49_I10

I49_I9

I49_I8

I49_I7

I49_I6

I49_I5


27

28

29

30

23

24

25

26

19

20

21

22

15

16

17

18

11

12

13

14

7

8

9

10



1

2

I71_I33

I71_I32

5

6

3

4

I71_I31

I71_I30

I71_I29

I71_I28

I71_I27

I71_I26

I71_I25

I70_I48

I70_I47

I70_I46

I70_I45

I70_I44

I70_I35

I70_I34

I70_I33

I70_I32

I70_I31

I70_I30

I70_I29

I70_I28

I70_I43

I70_I42

I70_I41

I70_I40

I70_I39

I70_I38

I70_I37

I70_I36



’

’ s M a n u a l l

59

60

61

62

55

56

57

58

51

52

53

54

47

48

49

50

43

44

45

46

39

40

41

42

35

36

37

38

31

32

33

34


I69_I27

I69_I26

I69_I25

I68_I48

I68_I47

I68_I46

I68_I45

I68_I44

I69_I35

I69_I34

I69_I33

I69_I32

I69_I31

I69_I30

I69_I29

I69_I28

I69_I43

I69_I42

I69_I41

I69_I40

I69_I39

I69_I38

I69_I37

I69_I36

I70_I27

I70_I26

I70_I25

I69_I48

I69_I47

I69_I46

I69_I45

I69_I44

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91

92

93

94

87

88

89

90

83

84

85

86

79

80

81

82

75

76

77

78

71

72

73

74

67

68

69

70

63

64

65

66

I67_I43

I67_I42

I67_I41

I67_I40

I67_I39

I67_I38

I67_I37

I67_I36

I68_I27

I68_I26

I68_I25

I67_I48

I67_I47

I67_I46

I67_I45

I67_I44

I68_I35

I68_I34

I68_I33

I68_I32

I68_I31

I68_I30

I68_I29

I68_I28

I68_I43

I68_I42

I68_I41

I68_I40

I68_I39

I68_I38

I68_I37

I68_I36


123

124

125

126

119

120

121

122

115

116

117

118

111

112

113

114

107

108

109

110

103

104

105

106

99

100

101

102

95

96

97

98

I66_I35

I66_I34

I66_I33

I66_I32

I66_I31

I66_I30

I66_I29

I66_I28

I66_I43

I66_I42

I66_I41

I66_I40

I66_I39

I66_I38

I66_I37

I66_I36

I67_I27

I67_I26

I67_I25

I66_I48

I66_I47

I66_I46

I66_I45

I66_I44

I67_I35

I67_I34

I67_I33

I67_I32

I67_I31

I67_I30

I67_I29

I67_I28

S o

S

f f t

M

t w

O

a

S

r e

D a

U s

t

s

a

e r r

’

’

V

s

i i e

M

w

a

e

n

r

u a l l

155

156

157

158

151

152

153

154

147

148

149

150

143

144

145

146

139

140

141

142

135

136

137

138

131

132

133

134

127

128

129

130


I65_I27

I65_I26

I65_I25

I64_I48

I64_I47

I64_I46

I64_I45

I64_I44

I65_I35

I65_I34

I65_I33

I65_I32

I65_I31

I65_I30

I65_I29

I65_I28

I65_I43

I65_I42

I65_I41

I65_I40

I65_I39

I65_I38

I65_I37

I65_I36

I66_I27

I66_I26

I66_I25

I65_I48

I65_I47

I65_I46

I65_I45

I65_I44

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188

189

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183

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185

186

179

180

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182

175

176

177

178

171

172

173

174

167

168

169

170

163

164

165

166

159

160

161

162

I63_I43

I63_I42

I63_I41

I63_I40

I63_I39

I63_I38

I63_I37

I63_I36

I64_I27

I64_I26

I64_I25

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End of Document

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User Manual

CONTAINER_LEVEL_B 1

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